AndreaBozzo/ceres-open-data-index huggingface dataset:
Data integration - birds, mammals, fish, and invertebrates

The Office of National Marine Sanctuary Program (ONMS) updates and revises the management plans for each of its 13 sanctuaries. This process, which is open to the public, enables each site to revisit the reasons for sanctuary designation and assess whether they are meeting their goals, as well as to set new goals consistent with the mandates of the National Marine Sanctuaries Act. Issues raised by the public during this process are evaluated and a determination is made as to whether they will be incorporated into the updated plan. Many of these issues focus on topics such as the implementation of marine zoning or sanctuary boundary adjustments, both of which require information on the distribution of resources within and around the sanctuary. Recognizing this, ONMS and NOAA's National Centers for Coastal Ocean Science (NCCOS) formalized an agreement to collaborate in the revision process by developing such information through a series of biogeographic assessments conducted in selected sanctuaries. The resulting products are then supplied to sanctuary managers and staff for use in the policy and decision making process. This collaborative effort began along the west coast of the U.S. with the Cordell Bank, Gulf of Farallones, and Monterey Bay national marine sanctuaries, and is herein centered on the Channel Islands National Marine Sanctuary (CINMS).

Tags: California, Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, U.S. Department of Commerce, continent--north-america--united-states-of-america--california, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsinvertebrates, earth-science--biological-classification--animalsvertebrates--birds, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biological-classification--animalsvertebrates--mammals, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science--oceans--marine-biology--invertebrates, earth-science--oceans--marine-biology--marine-birds, earth-science--oceans--marine-biology--marine-mammals, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons
Organization: National Oceanic and Atmospheric Administration
Bocaccio larvae distribution off California

The National Marine Sanctuary Program (NMSP) updates and revises the management plans for each of its 13 sanctuaries. This process, which is open to the public, enables each site to revisit the reasons for sanctuary designation and assess whether they are meeting their goals, as well as to set new goals consistent with the mandates of the National Marine Sanctuaries Act. Issues raised by the public during this process are evaluated and a determination is made as to whether they will be incorporated into the updated plan. Many of these issues focus on topics such as the implementation of marine zoning or sanctuary boundary adjustments, both of which require information on the distribution of resources within and around the sanctuary. Recognizing this, NMSP and NOAA?s National Centers for Coastal Ocean Science (NCCOS) formalized an agreement to collaborate in the revision process by developing such information through a series of biogeographic assessments conducted in selected sanctuaries. The resulting products are then supplied to sanctuary managers and staff for use in the policy and decision making process. This collaborative effort began along the west coast of the U.S. with the Cordell Bank, Gulf of Farallones, and Monterey Bay national marine sanctuaries, and is herein centered on the Channel Islands National Marine Sanctuary (CINMS).

Tags: California, Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, U.S. Department of Commerce, continent--north-america--united-states-of-america--california, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsvertebrates--fish--ray-finned-fishes--perch-like-fi, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons, visual-images--fish
Organization: National Oceanic and Atmospheric Administration
FISH SPECIES, SALINITY and other data from VARIOUS SMALL VESSELS from 1977-04-28 to 1994-08-27 (NODC Accession 9800173)

missing

Tags: NOAA, data.gov, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--oceans--marine-sediments, earth-science--oceans--ocean-chemistry--chlorophyll, earth-science--oceans--ocean-chemistry--hydrocarbons, earth-science--oceans--ocean-chemistry--suspended-solids, earth-science--oceans--ocean-optics--attenuationtransmission, earth-science--oceans--ocean-optics--fluorescence, earth-science--oceans--ocean-pressure--water-pressure, earth-science--oceans--ocean-temperature--water-temperature, earth-science--oceans--salinitydensity--conductivity, earth-science--oceans--salinitydensity--density, earth-science--oceans--salinitydensity--salinity, oceanography
Organization: National Oceanic and Atmospheric Administration
Environmental Sensitivity Index (ESI) Atlases: A sampling of digital data for geographic information systems, South Carolina, California, Hawaii, Oregon, Washington (NODC Accession 0046075)

This CD-ROM product from the NOAA National Ocean Service Hazardous Materials Response and Assessment Division contains a collection of Environmental Sensitivity Index (ESI) maps and data in text and native .e00 files suitable for use with Geographic Information Systems (GIS) software.

Samples of GIS data are included for the following locations: coastal central California, coastal northern California, San Francisco Bay area, central and southern Puget Sound, coastal Oregon, coastal Washington, Hawaii, coastal South Carolina, and the Colorado River basin. These data characterize coastal environments by their sensitivity to spilled oil and include information for shoreline habitats.

Tags: NOAA, data.gov, earth-science--agriculture--agricultural-aquatic-sciences--fisheries, earth-science--biological-classification, earth-science--biological-classification--animalsinvertebrates, earth-science--biological-classification--animalsvertebrates, earth-science--biological-classification--animalsvertebrates--birds, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biological-classification--animalsvertebrates--mammals, earth-science--biological-classification--animalsvertebrates--reptiles, earth-science--human-dimensions--socioeconomics, earth-science--oceans--coastal-processes--shorelines, earth-science--solid-earth--geomorphic-landformsprocesses--coastal-landforms--coral-reefs, ocean--atlantic-ocean--north-atlantic-ocean, ocean--pacific-ocean--north-pacific-ocean, oceanography
Organization: National Oceanic and Atmospheric Administration
Fish and invertebrate data integration.

The National Marine Sanctuary Program (NMSP) updates and revises the management plans for each of its 13 sanctuaries. This process, which is open to the public, enables each site to revisit the reasons for sanctuary designation and assess whether they are meeting their goals, as well as to set new goals consistent with the mandates of the National Marine Sanctuaries Act. Issues raised by the public during this process are evaluated and a determination is made as to whether they will be incorporated into the updated plan. Many of these issues focus on topics such as the implementation of marine zoning or sanctuary boundary adjustments, both of which require information on the distribution of resources within and around the sanctuary. Recognizing this, NMSP and NOAA?s National Centers for Coastal Ocean Science (NCCOS) formalized an agreement to collaborate in the revision process by developing such information through a series of biogeographic assessments conducted in selected sanctuaries. The resulting products are then supplied to sanctuary managers and staff for use in the policy and decision making process. This collaborative effort began along the west coast of the U.S. with the Cordell Bank, Gulf of Farallones, and Monterey Bay national marine sanctuaries, and is herein centered on the Channel Islands National Marine Sanctuary (CINMS).

Tags: California, Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, U.S. Department of Commerce, continent--north-america--united-states-of-america--california, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsinvertebrates, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science--oceans--marine-biology--invertebrates, earth-science--oceans--marine-biology--marine-birds, earth-science--oceans--marine-biology--marine-mammals, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons
Organization: National Oceanic and Atmospheric Administration
Relative Bycatch:Target Catch Probability Product (daily), EcoCast Project

The Relative Bycatch:Target Catch Probability Product is produced using a data-driven, multi-species predictive habitat modelling framework. First, boosted regression tree models were fit to determine the habitat preferences of the target species, broadbill swordfish (Xiphias gladius), and three bycatch-sensitive species that interact with the California drift gillnet fishery (leatherback sea turtle (Dermochelys coricea), blue shark (Prionace glauca), California sea lion (Zalophus californianus)). Then, individual species weightings were set to reflect the level of bycatch and management concern for each species. Prediction layers for each species were then combined into a single surface by multiplying the layer by the species weighting, summing the layers, and then re-calculating the range of values in the final predictive surface from -1 (low catch & high bycatch probabilities) to 1 (high catch & low bycatch probabilities).

Tags: California, California sea lion, Dermochelys coricea, Ecocast, NOAA, Prionace glauca, SWFSC, Southwest fisheries, Zalophus californianus, blue shark, data.gov, dynamic ecosystem management, earth-science--biological-classification--animalsvertebrates--fish--ray-finned-fishes, earth-science--biological-classification--animalsvertebrates--fish--sharksrayschimaeras, earth-science--biological-classification--animalsvertebrates--mammals--carnivores--sealssea-lionswal, earth-science--biological-classification--animalsvertebrates--reptiles--turtles, earth-science--human-dimensions--environmental-governancemanagement--environmental-regulations, earth-science--human-dimensions--sustainability--environmental-sustainability, earth-science--oceans--marine-environment-monitoring, latitude, leatherback sea turtle, longitude, ocean, time
Organization: National Oceanic and Atmospheric Administration
Environmental Sensitivity Index (ESI) Atlas: San Francisco Bay - 1998, maps and geographic information systems data (NODC Accession 0036884)

This data set comprises the Environmental Sensitivity Index (ESI) maps for the shoreline of San Francisco Bay. ESI data characterize estuarine environments and wildlife by their sensitivity to spilled oil. These data are a re-release of the San Francisco, California ESI digital data originally published in March 2001 (NODC Accession Number 0013224). This re-release includes data in a Geodatabase format with an .mxd and layer files for use with the ArcGIS product line. The .mxd and the layer files were both created in ArcMap 9.2, and will require that version or later for use.

The ESI data include information for three main components: shoreline habitats; sensitive biological resources; and human-use resources. This atlas was developed to be utilized within desktop GIS systems and contains GIS (shape) files and related D-base files. Associated files include MOSS (Multiple Overlay Statistical System) export files, .PDF maps, and detailed documentation and metadata.

Tags: California, Coastal California, Coastal resources, Hydrology, NOAA, Oil spill planning, San Francisco Bay, Sensitivity maps, data.gov, earth-science--agriculture--agricultural-aquatic-sciences--fisheries, earth-science--biological-classification, earth-science--biological-classification--animalsinvertebrates, earth-science--biological-classification--animalsvertebrates, earth-science--biological-classification--animalsvertebrates--birds, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biological-classification--animalsvertebrates--mammals, earth-science--biological-classification--animalsvertebrates--reptiles, earth-science--biosphere--aquatic-habitat--benthic-habitat, earth-science--biosphere--ecological-dynamics--species-richness, earth-science--biosphere--ecosystems--marine-ecosystems--coastal, earth-science--biosphere--zoology--vertebrates, earth-science--human-dimensions--environmental-impacts--chemical-spills, earth-science--human-dimensions--environmental-impacts--oil-spills, earth-science--hydrosphere--water-quality--hydrocarbons, earth-science--oceans--coastal-processes--shorelines, earth-science--oceans--marine-biology--fish, earth-science--oceans--marine-biology--marine-birds, earth-science--oceans--marine-biology--marine-invertebrates, earth-science--oceans--marine-biology--marine-reptiles, geographic-information--ecological-characterization, geographic-information--habitats, geographic-information--shorelines, ocean--pacific-ocean--north-pacific-ocean, oceanography
Organization: National Oceanic and Atmospheric Administration
Ecological Assessment of Storm Impacts on Marine Resources (EASI)

The project provides information that can be used in preliminary land use-based risk assessments for pesticides potentially used in the St. Johns River watershed, and for a broad suite of contaminant types in the lower Columbia River watershed of Oregon and Washington states, U.S.A.

Tags: Columbia River, EC50, Environmental Monitoring, Florida, Koc, Kow, LC50, NOAA, Oregon, PAH, St. Johns River, Washington, agriculture, algae, bay, bird, chemical, coastal, contaminant, contamination, creek, crustacean, data.gov, ecotoxicology, estuaries, estuary, exposure, fish, fish kill, fungicide, half-life, hazard, herbicide, insecticide, land use, landuse, load, marine, marsh, metal, molluscan, molluscicide, mollusk, persistence, pesticide, poison, pollutant, polluted, pollution, rat, residential, risk, risk assessment, river, roadway, run off, runoff, shellfish, solubility, storm, stormwater, surface water, toxic, toxicant, toxicity, toxicology, urban, water quality, watershed
Organization: National Oceanic and Atmospheric Administration
Fish diversity in southern California using scuba surveys in kelp forests.

The Shannon Index of diversity was calculated from diver surveys on kelp beds in Southern California.  Kelp diver visual census data was combined for two separate southern California datasets. The Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO) provided information collected at 15 sites, and Vantuna Research Group (VRG) at 29 sites.  Visual transect surveys were completed by SCUBA divers along the bottom of the kelp forest.  The VRG dataset provided fish counts along 2m x 60m transects which were subsequently averaged for comparison with the PISCO dataset. The PISCO dataset provided mean counts along a 2m x 30m transect which were doubled before combining with the VRG data.   The diversity analysis included 84 species of fish.

Tags: Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, Southern California, U.S. Department of Commerce, continent--north-america--united-states-of-america--california, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons
Organization: National Oceanic and Atmospheric Administration
Composite fish diversity off southern California

This map shows composite diversity averaged between 4 data sets:  RecFIN recreational hook and line, SCCWRP trawls, NMFS benthic trawls, and kelp diver surveys.  Diversity (H') was calculated independently for each of the four large datasets on a total of 364 species using the Shannon index of diversity (Shannon and Weaver, 1949).  Using ArcGIS, 5 x 5 minute grids were created and mean diversity was calculated for each grid cell containing data.  To provide an overall map of diversity, results from the four datasets were combined.  To standardize, gridded results from each dataset were divided into quintiles with 5 denoting the greatest diversity and 1 the least diversity.  The standardized diversity was averaged where more than one diversity estimate was available for a cell.  Standardization re-scales the results from all datasets to the same scale.  This process can remove some differences that result from variable collection methods; however, it can also minimize actual differences between habitats.

Tags: California, Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, Southern California, U.S. Department of Commerce, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons
Organization: National Oceanic and Atmospheric Administration
Fish diversity in central and southern California using fish catch and effort data from the Recreational Fisheries Information Network

This dataset was provided by the Recreational Fisheries Information Network (RecFIN), and contained GPS coordinates for 680 CPFV trips during 1999 and 2001 at depths ranging from 0 - 2200 m.  Fishers targeted specific species during each trip, and visited between 1 and 22 locations.  Each trip/location combination was considered a unique site and was used as a sample unit in analyses.  RecFIN provided information on four hook and line fishing methods: free drift, stationary drift, anchor, and troll.  The trolling trips were removed before analysis because they targeted specific pelagic species and therefore provide limited information about diversity.  The final data set analyzed for diversity contained information on 130 fish species at 4085 trip/location combinations.  Diversity was calculated for each trip/location using the Shannon Index of diversity.  Using ArcGIS, 5 x 5 minute grids were created and mean diversity was calculated for each grid cell containing data.

Tags: Channel Islands National Marine Sanctuary, Environmental Monitoring, NOAA, National Ocean Service, Southern California, U.S. Department of Commerce, continent--north-america--united-states-of-america--california, data.gov, docnoaanosnccos--national-centers-for-coastal-ocean-science, earth-science--biological-classification--animalsvertebrates--fish, earth-science--biosphere--ecological-dynamics--community-dynamics--community-structure, earth-science--biosphere--ecological-dynamics--ecosystem-functions, earth-science--biosphere--ecological-dynamics--speciespopulation-interactions--usefeeding-habitats, earth-science--biosphere--ecosystems--marine-ecosystems--benthic, earth-science--biosphere--ecosystems--marine-ecosystems--pelagic, earth-science--human-dimensions--environmental-governancemanagement--environmental-assessments, earth-science--oceans--marine-biology--fish, earth-science-services--models--dynamic-vegetationecosystem-models, geographic-information--polygons
Organization: National Oceanic and Atmospheric Administration