AndreaBozzo/ceres-open-data-index huggingface dataset:
Beekeeper Inspections and Foulbrood Disease in England for 2007

This dataset provides figures for the number of bee keepers inspected by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2007 and is broken down to county level within England only.  This dataset includes the following fields: Region; County; Number of Beekeepers Inspected; Number of beekeepers receiving a positive American Foulbrood (AFB) diagnosis; Number of beekeepers receiving a positive European Foulbrood (EFB) diagnosis; Percentages (of beekeepers with colonies diagnosed positive for either AFB or EFB).  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Livestock Exports 2015

This dataset contains information on export applications for Intra-union trade, exports to Third Countries and exports for National Trade (Northern Ireland, the Isle of Man and the Channel Islands) of livestock (cattle, pigs, sheep and goats). The dataset contains columns for the animal species, the destination country of the export, the date the application was received, the export date, the Export Health Certificate (EHC) issued, the purpose of the animal(s) export (for breeding, fattening, production or slaughter) and if the EHC was cancelled. Where the EHC column does not contain data, the export is for Intra-union trade to a Member State of the European Union under Council Directives 64/432/EEC (as amended) or 91/68/EEC (as amended). This will include Intra-union trade certificates where the final destination was to a Third Country but the animal(s) transited the EU en route and were therefore required to have Intra-union trade certification issued as well as an EHC. This dataset is for livestock exports where the loading address was in England only. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, export licence
Organization: Animal and Plant Health Agency
Distribution of farms in GB by number of confirmed BSE cases (excluding dealers and survey cases)

This dataset shows the distribution of farms in Great Britain by number of confirmed BSE (Bovine Spongiform Encephalopathy) cases (excluding dealers and survey cases) between 1988 and 2016. The dataset includes the following fields: Number of cases; Number of farms; Percent (of total farms). 
Please note: this data is available as part of a wider report on TSE surveillance, published on gov.uk. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, statistics, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Controlled Plant Goods 2012

This dataset provides a summary of the Import Inspection Statistics for Controlled Plant Goods 2012.  Controlled goods are those  which are subject to formal plant health controls when imported, including the provision of a phytosanitary certificate.  'Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name, Number of consignments, Total weight, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  A 'PHMD' is required where goods are to clear customs in an EU country other than the one in which they landed.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Journey Log Register 2012

This dataset provides a list of the requests for a transport journey log for the export of cattle, pigs, sheep, goats and horses in accordance with Council Regulation (EC) No 1/2005 enforced in England by the Welfare of Animals (Transport) (England) Order 2006. The dataset contains the date the journey log application was received and the planned export date, the destination country of the export consignment, the species of animal being exported and if the species of animal are weaned or unweaned, the purpose of the animals being exported and if the export was cancelled. This dataset covers journey logs issued where the premises of origin of the export consignment was in England only. Council Regulation (EC) No 1/2005 does not provide a definition of 'unweaned' animals but the EU Commission have provided guidance to EU Member States to the effect that calves under the age of 60 days and lambs under the age of six weeks are considered to be unweaned. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, export licence
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods by Point of Entry 2015

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods by Point of Entry (POE) 2015.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields:  Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate),  Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Number of confirmed cases of BSE from active surveillance in England by county

Table to show total number of active BSE (Bovine Spongiform Encephalopathy) cases and farms affected in each county in England, split by region and county. The dataset includes the following fields; Region (of the country); County; Farms (number of farms in that county with BSE cases); Cases (number of cases in that county). 
Please note: this data is available as part of a wider report on TSE surveillance, published on gov.uk. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, statistics, surveillance
Organization: Animal and Plant Health Agency
Dog population per postcode district

This dataset is a modelled dataset, describing the predicted population of dogs per postcode district (e.g. YO41). This dataset gives the mean estimate for population for each district, and was generated as part of the delivery of commissioned research. The data contained within this dataset are modelled figures, based on national estimates for pet population, and available information on Veterinary activity across GB. The data are accurate as of 01/01/2015. The data provided are summarised to the postcode district level.  Further information on this research is available in a research publication by James Aegerter, David Fouracre & Graham C. Smith, discussing the structure and density of pet cat and dog populations across Great Britain. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, pet, research project
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Surveillance - Positive Results Summary 2012

This dataset provides information on Potato Cyst Nematode (PCN) surveillance, Positive Results Summary, during 2012. The dataset is broken down by region, and includes the fields: PCN+ve (positive for Potato Cyst Nematode), Region, Visit date, Job description, Task, Sample area (Hectares), Cysts non viable, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infected, Combined pallida rostochiensis infected, Area combined pallida rostochiensis infected. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Apiary Inspections for Exotic Pests in England - 2008

This dataset provides figures for the number of apiaries and colonies inspected for Exotic pests by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2008, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of Apiaries Inspected; No. of Colonies Inspected (figures for total number inspected, and number of dead colonies inspected); Number of colonies with Small hive beetle; Number of colonies with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Salmonella other than Salmonella Dublin and Salmonella Typhimurium: antimicrobial susceptibility monitoring 2001 - 2014

The data shows, for years 2001 to 2014, the number of cultures (isolates) and the percentage of  Salmonella (other than Salmonella Dublin and Salmonella Typhimurium) cultures , across all tested species, that are resistant to 16 antimicrobials. The data is grouped by year, the numbers of cultures, percentage of resistance. The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Confirmed Notifiable Disease Cases: England 2014

This dataset provides figures for the number of confirmed Exotic Notifiable Disease investigations carried out by the Animal and Plant Health Agency in England during 2014.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases in this context are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom.  
This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc.
Disease is confirmed by the Chief Veterinary Officer following an investigation by APHA which includes clinical investigation and laboratory testing.
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Apiary Inspections for Exotic Pests in England - 2011

This dataset provides figures for the number of apiaries and colonies inspected for Exotic pests by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2011, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of Apiaries Inspected; No. of Colonies Inspected (figures for total number inspected, and number of dead colonies inspected); Number of colonies with Small hive beetle; Number of colonies with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
National Control Plan for Salmonella Chicken Breeder Flocks Operator Sampled England 2012

This dataset details the chicken breeder flocks in England where official routine sampling, under the National Control Programmes for Salmonella, was carried out by Animal and Plant Health Agency staff in 2012. The dataset details region, the date of the sampling visit, flock type, the number of flocks sampled for salmonella and the result. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Summary of Unregulated Plant Imports 2013

This dataset provides a summary of Unregulated Imports checks undertaken in 2013.  Plant materials that are not subject to formal phytosantiary controls and which do not have an EU inspection target are described as 'unregulated'.  The Animal and Plant Health Agency's Plant Inspectors check some of these consignments to ensure that there are no new risks or pathways that have been overlooked by the EU regulations.  This dataset includes the fields: Botanical Name, Country of Origin, Year, Number of consignments. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Survey - Ware Exports 2012

This dataset provides information on Potato Cyst Nematode (PCN) sampling for Ware Exports during 2012.  Ware potatoes are those sold for consumption.  The dataset is broken down by region, and includes the fields: Region, Visit date, Job code,  Job description, Quantity area (Hectares), Cysts non viable, Fields non viable cysts, Area non viable cysts, Cysts viable globodera pallida,  Cysts viable globodera rostochiensis, Pallida infested, Quantity area (Hectares) pallida infested, Rostochiensis infected, Quantity area (Hectares) rostochiensis infected, Combined pallida rostochiensis infected, Quantity area (Hectares) combined pallida rostochiensis infected. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Samples Submitted by Beekeepers for Analysis of Exotic Pests in England - 2008

This dataset provides figures for the number of samples submitted for testing by beekeepers.  The dataset gives figures for samples submitted during 2008, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of samples submitted; No. of samples with Small hive beetle; No. of samples with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Allelic diversity among 12 commonest spoligotype of bTB in GB

Allelic diversity among 5387 isolates of 12 commonest spoligotype of bovine tuberculosis (bTB) in GB.  The allelic diversity is a measure of genotype diversity within each spoligotype.  In short, the allelic diversity measures the probability of seeing the same VNTR variant of a spoligotype (that is, genotype) if one randomly picks two isolates from a large, randomly collected, population of isolates with the same spoligitype.  Only one isolate from each breakdown was used  in this analysis [hence 'freq (unique)] Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Sampling - Seed Potato Classification Scheme 2011

This dataset provides information on the Potato Cyst Nematode (PCN) sampling for entry into the  Seed Potato Classification Scheme (SPCS) during 2011.  Seed Potatoes are those intended for use as seeds for future crops rather than consumption.  The dataset includes the fields: Visit date, Job description, PCN +ve (positive for PCN), Sample area (Hectares), Number of samples, Cysts present Y/N, Cysts non viable, Fields non viable cysts, Area non viable cysts, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infested, Combined pallida & rostochiensis infested, Area combined pallida & rostochiensis infested. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Disease Vocabulary Notifiable Diseases

This vocabulary contains a list of notifiable diseases Great Britian.  Notifiable diseases in this context are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. 
For more a definitive list of notifiable disease in Great Britain please see the notifiable diseases register Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Products of Animal Origin Import Licences for Research Purposes 2014

This dataset covers licences issued by APHA for the import of products of animal origin (apart from Fish and Honey Products up to 16 July 2014) imported for research purposes. The dataset covers the date the application was received, the country of origin of the product, the amount of product imported, port of entry in England, the validity period of the licence and the date APHA issued the licence. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, import, import licence
Organization: Animal and Plant Health Agency
Seed Potatoes Export Data - 2014

This dataset provides information on the Seed Potatoes Exports in 2014.  Seed potatoes are those intended for use as seeds for future crops rather than consumption. This dataset includes the fields: Phyto issue date, Area code (CT (Central), ER (Eastern), NE (North East), NW (North West), SE (South East), SO (Southern), SW (South West), WL (Wales & West Midlands)), Export country, Commodity type, Plant variety, Consignment ID, Quantity exported, Unit.  'Phytos' are Phytosanitary Certificates, produced by plant health authorities to certify that a plant commodity is healthy prior to export. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Negated Notifiable Disease Investigations: England 2014

This dataset provides figures for the number of negated Exotic Notifiable Disease investigations carried out in England during 2014.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. A report case is negated if after a clinical examination and in some cases further diagnostic testing there is sufficient evidence for the Chief Veterinary Officer to negate presence of the disease. This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc. 
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency