AndreaBozzo/ceres-open-data-index huggingface dataset:
QICS Data: Gene expression data of scallops Pecten maximus and mussels Mytilus edulis held in the vicinity of a sub-seabed CO2 release (2012)

The QICS project (Quantifying and Monitoring Potential Ecosystem Impacts of Geological Carbons Storage) was established to improve our understanding of the potential impacts of CO2 release on the environment and to develop tools and best practice for monitoring sub-seabed CCS reservoirs. To monitor the potential impact of a CO2 leak to surficial benthic megafauna, cages of bivalves (the common mussel Mytilus edulis Linnaeus, 1758 and the king scallop Pecten maximus (Linnaeus, 1758)) were deployed at the gas release site and at a reference site in the QICS experiment - both within Ardmucknish Bay, Oban, Scotland. Replicate individuals were sampled at six time points over a 125-day period, which spanned both the 37-day injection and recovery phases of the experiment, in order to establish impacts to molecular physiology. Samples of bivalves were also simultaneously sampled from a reference site within the bay in order to contrast changes in physiology induced by the gas release with naturally variability in the physiological performance of both species. There was no evidence of gene regulation of either selected carbonic anhydrases (CAx genes) or the alpha subunit of sodium potassium ATPAses (ATP1A genes) in individual bivalves collected from the CO2 gas release site, in either species. In the common mussel Mytilus edulis there was only evidence for changes with time in the expression of genes coding for different classes of carbonic anhydrase. It was concluded that the effects of the plume of elevated pCO2 on ion-regulatory gene transcription were negligible in both species. Pratt et al. 2015. No evidence for impacts to the molecular ecophysiology of ion or CO2 regulation in tissues of selected surface-dwelling bivalves in the vicinity of a sub-seabed CO2 release. International Journal of Greenhouse Gas Control. DOI:10.1016/j.ijggc.2014.10.001. QICS project website: www.bgs.ac.uk/qics/home.html.

Tags: Carbon, Environmental impact, Monitoring, NERC_DDC, Storage
Organization: British Geological Survey (BGS)
QICS Data: 2D high-resolution seismic reflection data collected pre-release and syn-release stages of CO2 in Ardmucknish Bay (2012)

CO2 was injected into shallow unconsolidated marine sediments in Ardmucknish Bay, Oban. 2D seismic reflection data were collected pre-release (15/05/2012), syn-release (17/05/2012, 18/05/2012, 19/052012, 29/05/2012, 30/05/2012, 20/06/2012) and after release stages (23/04/2014 and 24/04/2014) of CO2 help to better understand the spatial and temporal evolution of free gas anomalies within the overburden. The impact of CO2 on sediment acoustic properties, namely seismic reflectivity and attenuation, was also investigated. This dataset was collected by the National Oceanography Centre Southampton (NOCS) and the British Geological Survey (BGS) under the program QICS (Quantifying and monitoring environmental impacts of geological carbon storage) which was funded by the Natural Environment Research Council (NERC), with support from the Scottish Government. The dataset includes segy files, a presentation which summarises the main results and a map showing the spatial extent of the seismic data collected after gas release. QICS project website: http://www.bgs.ac.uk/qics/home.html. Cevatoglu et al., 2015. Gas migration pathways, controlling mechanisms and changes in sediment acoustic properties observed in a controlled sub-seabed CO2 release experiment. Int J Greenhouse Gas Control. DOI:10.1016/j.ijggc.2015.03.005. The post-release data is currently restricted. NERC grant NE/H013873/1

Tags: Carbon, Environmental impact, Geophysics, NERC_DDC, Seismic reflection surveys, Storage
Organization: British Geological Survey (BGS)
Carbonatite-derived, carbonate-bearing fluorapatite compositions from Kovdor, Sokli, Bukusu, Catalao II, and Glenover (NERC Grant NE/R013403/1)

Mineralogical data relating to carbonate-bearing fluorapatite from the Bukusu, Catalao II, Sokli, Kovdor and Glenover carboantite complexes. Report on the data is here: Broom-Fendley, S., Siegfried, P.R., Wall, F. et al. The origin and composition of carbonatite-derived carbonate-bearing fluorapatite deposits. Miner Deposita 56, 863-884 (2021). https://doi.org/10.1007/s00126-020-01010-7.

Tags: Apatite, Carbonatite, NERC_DDC
Organization: British Geological Survey (BGS)
QICS Data: Effect of a controlled sub-seabed release of CO2 on the biogeochemistry of shallow marine sediments, pore waters, and the overlying water (2012-2013)

The potential for leakage of CO2 from a storage reservoir into the overlying marine sediments and into the water column and the impacts on benthic ecosystems are major challenges The potential for leakage of CO2 from a storage reservoir into the overlying marine sediments and into the water column and the impacts on benthic ecosystems are major challenges associated with Carbon Capture and Storage (CCS) in subseafloor reservoirs. To investigate the consequences of CO2 leakage for the marine environment, a field-scale controlled CO2 release experiment was conducted in shallow, unconsolidated marine sediments. Changes of the chemical composition of the sediments, their pore waters and overlying water column were monitored before, during and up to 1 year after the 37-day long CO2 release from May 2012 to May 2013. In particular this focused on changes in the solid phase (physical properties, major and minor elemental composition, inorganic and organic carbon content), the pore water chemical composition (cations, anions, nutrients and the carbonate system parameters total alkalinity, dissolved inorganic carbon and isotopic signature of DIC) and the water column chemical composition (oxygen, nutrients, total alkalinity and dissolved inorganic carbon). This dataset was collected by the National Oceanography Centre (NOC) under the program QICS (Quantifying and monitoring environmental impacts of geological carbon storage) which was funded by the Natural Environment Research Council (NERC), with support from the Scottish Government. The results are contained in an Excel file. QICS project website: www.bgs.ac.uk/qics/home.html. Lichtschlag et al. (2014) Effect of a controlled sub-seabed release of CO2 on the biogeochemistry of shallow marine sediments, their pore waters, and the overlying water column, http://www.sciencedirect.com/science/article/pii/S1750583614003090 (doi:10.1016/j.ijggc.2014.10.008).

Tags: Biogeochemistry, Carbon, Environmental impact, Metals, NERC_DDC, Sediments, Storage
Organization: British Geological Survey (BGS)
QICS Data: Effect of a controlled sub-seabed release of CO2 on the meiofauna community of shallow marine sediments (2012 - 2013)

The potential for leakage of CO2 from a storage reservoir into the overlying marine sediments and into the water column and the impacts on benthic ecosystems are major challenges associated with Carbon Capture and Storage (CCS) in subseafloor reservoirs. A field-scale controlled CO2 release experiment was conducted in shallow, unconsolidated marine sediments. Changes were monitored of the chemical composition of the sediments and overlying water column before, during and up to 1 year after the 37-day long CO2 release from May 2012 to May 2013 in Ardmucknish Bay. Meiofaunal samples were collected and meiofauna higher taxa and the nematodes species (where possible) were identified by Plymouth Marine Laboratory. This dataset was collected under the program QICS (Quantifying and monitoring environmental impacts of geological carbon storage) which was funded by the Natural Environment Research Council (NERC), with support from the Scottish Government. The results are contained in an Excel file. QICS project website: www.bgs.ac.uk/qics/home.html. This data is currently under embargo until publication of the dataset in research article (estimated end of 2015).

Tags: Carbon, Environmental impact, NERC_DDC, Storage
Organization: British Geological Survey (BGS)
QICS Data: Effect of a controlled sub-seabed release of CO2 in Ardmucknish Bay on microbial activity (2012 - 2014)

The response of the benthic microbial community to a controlled sub-seabed CO2 leak was assessed using quantitative PCR measurements of benthic bacterial, archaeal and cyanobacteria/chloroplast 16S rRNA genes. Similarly, the impact of CO2 release on the abundance of benthic bacterial and archaeal ammonia amoA genes and transcripts, and also to the abundance of nitrite oxidizer (nirS) and anammox hydrazine oxidoreductase (hzo) genes and transcripts. Samples were taken from four zones (epicentre (zone 1); 25m distant (zone 2), 75m distant (zone 3) and 450m distant (zone 4)) during 6 time points (7 days before CO2 exposure, after 14 and 36 days of CO2 release, and 6, 20 and 90 days after the CO2 release had ended). Changes to the active community of microphytobenthos and bacteria were also assessed before, during and after CO2 release using Denaturing Gradient Gel Electrophoresis of cyanobacteria/chloroplast 16S rRNA. Changes to the composition of the active bacterial community was assessed first using Terminal Restriction Fragment Length Polymorphism (T-RFLP) of bacterial 16S rRNA. In depth comparisons of possible changes to the active bacterial community at zone 1 and 4 before, during and immediately after the CO2 release was performed using 16S rRNA 454 pyrosequencing. This dataset was created by Plymouth Marine Laboratory (PML) under the program QICS (Quantifying and monitoring environmental impacts of geological carbon storage) which was funded by the Natural Environment Research Council (NERC), with support from the Scottish Government. The results are contained in three text files. QICS project website: www.bgs.ac.uk/qics/home.html. Tait et al. (2015) Rapid response of the active microbial community to CO2 exposure from a controlled sub-seabed CO2 leak in Ardmucknish Bay (Oban, Scotland). IJGGC DOI: 10.1016/ijggc.2014.11.021. Watanabe et al. (2015) Ammonia oxidation activity of microorganisms in surface sediment to a controlled sub-seabed release of CO2. IJGGC DOI: 10.1016/j.ijggc.2014.11.013.

Tags: Bacteria, Carbon, Environmental impact, Monitoring, NERC_DDC, Nitrogen cycle, Storage
Organization: British Geological Survey (BGS)
NERC Project: QICS - Quantifying and monitoring environmental impacts of geological carbon storage (2010 - 2014)

QICS (Quantifying and monitoring environmental impacts of geological carbon storage) was a program funded by the Natural Environment Research Council (NERC), with support from the Scottish Government (May 2010 - December 2014) with two objectives. Firstly, to assess if any significant environmental impact would arise, if a leak from sub-sea, deep geological storage of carbon dioxide occurred. Secondly, to test and recommend tools and strategies for monitoring for (or assuring the absence of) leakage at the sea floor and in overlying waters. This data set provides a short overview of the novel experimental procedure - a world first leakage simulation in the natural environment and describes the experimental set up, sampling strategy including both temporal and spatial details. The data set consists of a pdf containing a text based project and experimental overview, a table outlining the temporal evolution of the experiment, including site selection, set up, baseline, impact and recovery phases and a diagram outlining the spatial sampling strategy. This data set contains an overview document collated by Plymouth Marine Laboratory. This provides the context for a number of specific related QICS datasets submitted to the UKCCS data archive, covering a range of geological, chemical and ecological information. QICS project website: www.bgs.ac.uk/qics/home.html. Blackford et al., 2014. Detection and impacts of leakage from sub-seafloor deep geological carbon dioxide storage. Nature Climate Change 4, 1011-1016. DOI: 10.1038/NCLIMATE2381. Taylor et al., 2015. A novel sub-seabed CO2 release experiment informing monitoring and impact assessment for geological carbon storage. Int J Greenhouse Gas Control. DOI:10.1016/j.ijggc.2014.09.007.

Tags: Carbon capture and storage, Environmental impact, Monitoring, NERC_DDC, Storage
Organization: British Geological Survey (BGS)
BRITICE-CHRONO (BRT) Multibeam, Geophysical and Sampling Survey 2014/6_JC106: BRITICE CHRONO (part 1): Irish Sea (16/Jul/2014 to 25/Aug/2014)

This marine multibeam, geophysical and sampling survey took place from 16/07/14 - 25/08/14 in the area of the Irish Sea East, Irish Sea West, Galaway Bay, Donegal Bay and Malin Sea on board the RRS James Cook. The survey was carried out by scientists from the BRITICE CHRONO Consortium (PI Colm O'Cofaigh) and sediment coring was carried out by the British Geological Survey (BGS) on behalf of the BRITICE CHRONO Consortium. BRITICE CHRONO is funded and supported by the Natural Environment Research Council (NERC) as a consortium project. The aim of the survey was a large vibrocoring effort to constrain the timing and retreat dynamics of the British Irish Ice Sheet. Sea floor bathymetry data were collected using a EM120 and EM710 multibeam system. Sub bottom seismic profiling data were collected using an SBP120 sub-bottom profiler. Seabed samples were collected using the 6 m BGS vibrocorer and 12 m NOC Piston corer. These data are archived by BGS, Durham University and Bangor University. Data are restricted to project partners for a 5 year moratorium period. Technical details of the survey are contained in the Cruise Report.

Organization: British Geological Survey (BGS)
High temperature and acoustic emissions experimental data on 'Comiso' Limestone (Ragusa Formation; Sicily, Italy)

This dataset contains raw experimental high temperature and acoustic emission testing data on ‘Comiso’ limestone samples as outlined in "Castagna, A., Ougier-Simonin, A., Benson, P. M., Browning, J., Walker, R. J., Fazio, M., & Vinciguerra, S. (2018). Thermal damage and pore pressure effects of the Brittle-Ductile transition in Comiso limestone. Journal of Geophysical Research: Solid Earth, 123(9), 7644-7660.s, http://dx.doi.org/10.1029/2017JB015105". The data is provided in a .zip folder for 2 experiments that are accompanied by a README file for introduction. Files format are Microsoft Excel Worksheet (.xlsx) and data are tabulated. Each file contains the corresponding relevant sample’s details and each column of data is clearly labelled, units included. For each experiment, local time, corrected time, temperature (in degrees Celsius), acoustic emission amplitude (in decibels) and counts were recorded. Cylindrical samples of ‘Comiso’ limestone samples (Ragusa Formation; Sicily) were heat-treated to investigate the effects of thermal stressing on the limestone’s microstructure. In all tests, a controlled heating rate of 1 °C/minute was applied, keeping the specimen at the desired maximum temperature for 30 minutes to allow complete temperature equilibration followed by natural cooling (generally less than<1 °C/minute). The experiments were conducted on the Carbolite CTF12/75/700 tube furnace of the Rock and Ice Physics Laboratory of the University College of London between the 22nd and 28th February, 2016. The experiment were conducted by Drs A. Castagna and J. Browning, both responsible for the collection and interpretation of the data.

Tags: Acoustic emission, Brittle deformation, Elastic theory, Limestone, NERC_DDC, Primary waves, Sedimentary rocks, Shear waves, Temperature control, Ultrasonic techniques
Organization: British Geological Survey (BGS)
BGS Geology - 10k (DiGMapGB-10) Linear version 2

Linear features (shown as polylines) represent seven classes of geological structural features e.g. faults, folds or landforms e.g. buried channels, glacial drainage channels at the ground or bedrock surface (beneath superficial deposits). The scale of the data is 1:10 000 scale. Onshore coverage is partial with approximately 30% of England, Scotland and Wales available in the version 2 data release. BGS intend to continue developing coverage at this scale; current focus is to include all large priority urban areas, along with road and rail transport corridors. Linear features are associated most closely with the bedrock theme either as an intrinsic part of it for example marine bands or affecting it in the case of faults. However landform elements are associated with both bedrock and superficial deposits. The linear features are organised into seven main categories: Alteration area indicating zones of change to the pre-existing rocks due to the application of heat and pressure can occur round structural features such as faults and dykes. Fault where a body of bedrock has been fractured and displaced by a large scale process affecting the earth's crust. Fold where strata are bent or deformed resulting from changes or movement of the earth's surface creating heat and pressure to reshape and transform the original horizontal strata. Folds appear on all scales, in all rock types and from a variety of causes. Fossil horizons where prolific fossil assemblages occur and can be used to help establishing the order in which deposits were laid down (stratigraphy). These horizons allow correlation where sediments of the same age look completely different due to variations in depositional environment. Mineral vein where concentrations of crystallised mineral occur within a rock, they are closely associated with faulting but may occur independently. Landforms define the landscape by its surface form; these include glacial features such as drumlins, eskers and ice margins. Rock identifies key (marker) beds, recognised as showing distinct physical characteristics or fossil content. Examples include coal seams, gypsum beds and marine bands. The data are available in vector format (containing the geometry of each feature linked to a database record describing their attributes) as ESRI shapefiles and are available under BGS data licence.

Tags: Data, Digital maps, GIS, Geology, Maps, NERC_DDC
Organization: British Geological Survey (BGS)
BGS Geology - 10k (DiGMapGB-10) Artificial version 2

Data identifies landscape areas (shown as polygons) attributed with type of artificial or man-made ground. It indicates areas where the ground surface has been significantly modified by human activity. The scale of the data is 1:10 000 scale. Onshore coverage is partial with approximately 30% of England, Scotland and Wales available in the version 2 data release. BGS intend to continue developing coverage at this scale; current focus is to include all large priority urban areas, along with road and rail transport corridors. Types of artificial ground include: Infilled ground areas where original geology has been removed and then wholly or partially back filled includes waste or landfill sites. Landscaped ground areas where surface has been reshaped includes former sand and gravel workings for recreation and amenity use. Made ground man made features including embankments and spoil heaps. Reclaimed ground are areas of land fill, where new ground is created, usually in coastal margins, may be for example a consequence of draining of submerged wetlands and beach rebuilding. Worked ground areas where ground has been removed including quarries and road cuttings. Disturbed ground areas of ill-defined shallow or near surface mineral workings where distinction cannot be made between made and worked ground. Whilst artificial ground may not be considered as part of the 'real geology' of bedrock and superficial deposits it does affect them. Artificial ground impacts on the near surface ground conditions which are important to human activities and economic development. Due to the constantly changing nature of land use and re-use/redevelopment caution must be exercised when using this data as it represents a snapshot in time rather than an evolving picture hence the data may become dated very rapidly. The data are available in vector format (containing the geometry of each feature linked to a database record describing their attributes) as ESRI shapefiles and are available under BGS data licence.

Tags: Data, Digital maps, GIS, Geology, Maps, NERC_DDC
Organization: British Geological Survey (BGS)
BGS Geology - 10k (DiGMapGB-10) Mass Movement version 2

Data identifying landscape areas (shown as polygons) attributed with type of mass movement e.g. landslip. The scale of the data is 1:10 000 scale. Onshore coverage is partial with approximately 30% of England, Scotland and Wales available in the version 2 data release. BGS intend to continue developing coverage at this scale; current focus is to include all large priority urban areas, along with road and rail transport corridors. Mass movement describes areas where deposits have moved down slope under gravity to form landslips. These landslips can affect bedrock, superficial or artificial ground. Mass movement deposits are described in the BGS Rock Classification Scheme Volume 4. However the data also includes foundered strata, where ground has collapsed due to subsidence (this is not described in the Rock Classification Scheme). Caution should be exercised with this data; historically BGS has not always recorded mass movement events and due to the dynamic nature of occurrence significant changes may have occurred since the data was released. The data are available in vector format (containing the geometry of each feature linked to a database record describing their attributes) as ESRI shapefiles and are available under BGS data licence.

Tags: Data, Digital maps, GIS, Geology, Maps, NERC_DDC
Organization: British Geological Survey (BGS)
BGS Geology - 10k (DiGMapGB-10) Superficial version 2

Data identifying landscape areas (shown as polygons) attributed with geological names and rock type descriptions. The scale of the data is 1:10 000 scale. Onshore coverage is partial with approximately 30% of England, Scotland and Wales available in the version 2 data release. BGS intend to continue developing coverage at this scale; current focus is to include all large priority urban areas, along with road and rail transport corridors. Superficial deposits are the youngest geological deposits formed during the most recent period of geological time, the Quaternary, which extends back about 2.58 million years from the present. They lie on top of older deposits or rocks referred to as bedrock. Superficial deposits were laid down by various natural processes such as action by ice, water, wind and weathering. As such, the deposits are denoted by their BGS lexicon name, which classifies them on the basis of mode of origin (lithogenesis) with names such as, 'glacial deposits', 'river terrace deposits' or 'blown sand'; or on the basis of their composition such as 'peat'. Most of these superficial deposits are unconsolidated sediments such as gravel, sand, silt and clay. The digital data includes attribution to identify each deposit type (in varying levels of detail) as described in the BGS Rock Classification Scheme (volume 4). The data are available in vector format (containing the geometry of each feature linked to a database record describing their attributes) as ESRI shapefiles and are available under BGS data licence.

Tags: Data, Digital maps, GIS, Geology, Maps, NERC_DDC
Organization: British Geological Survey (BGS)