AndreaBozzo/ceres-open-data-index huggingface dataset:
Negated Notifiable Disease Investigations: Scotland 2012

This dataset provides figures for the number of negated Exotic Notifiable Disease investigations carried out in Scotland during 2012.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. A report case is negated if after a clinical examination and in some cases further diagnostic testing there is sufficient evidence for the Chief Veterinary Officer(Scotland) to negate presence of the disease. This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc. 
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Reduced Plant Goods by Point of Entry 2014

This dataset provides a summary of the Import Inspection statistics for Reduced Goods by Point of Entry (POE) 2014.  Reduced goods are those where inspections are permitted at a less than 100% rate, becuase they are considered to be low risk imports.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name Variety/Type and Country of Origin, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Reduced % Jan - Dec 2015, Reduced % Oct - Dec 2014, Reduced % Jan - Dec 2014, Reduced % Jan - Dec 2013 (these were the required check levels for these calendar periods), Reduced inspection rate, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
National Control Plan for Salmonella Chicken Breeder Flocks Operator Sampled England 2013

This dataset details the chicken breeder flocks in England where official routine sampling, under the National Control Programmes for Salmonella, was carried out by Animal and Plant Health Agency staff in 2013. The dataset details region, the date of the sampling visit, flock type, the number of flocks sampled for salmonella and the result. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Negated Notifiable Disease Investigations: Scotland 2013

This dataset provides figures for the number of negated Exotic Notifiable Disease investigations carried out in Scotland during 2013.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. A report case is negated if after a clinical examination and in some cases further diagnostic testing there is sufficient evidence for the Chief Veterinary Officer(Scotland) to negate presence of the disease. This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc. 
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Comparisons - Serovars of Salmonella isolated from compound poultry feed in Great Britain (2012 - 2014)

Salmonella in animal feedingstuffs. This data lists and counts the Salmonella serovar isolations (2012-2014) obtained from testing compound poultry feed in relation to the Animal By-Products Regulations.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group on a single occasion.  The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Apiary Inspections and Foulbrood Disease in England for 2013

This dataset provides figures for the number of apiaries inspected by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  An 'apiary' is defined as the physical dwelling place of a single colony or multiple colonies of honeybees.  The dataset gives figures for inspections carried out during 2013, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; Apiaries Inspected; Number of apiaries receiving a positive American Foulbrood (AFB) diagnosis; Number of apiaries receiving a positive European Foulbrood (EFB) diagnosis; Percentages (of apiaries infected with either AFB or EFB).  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Live Animal Exports 2014

This dataset contains information on export applications received for Intra-union trade, exports to Third Countries and exports for National Trade (Northern Ireland) of live animals. The dataset contains columns for the Export Health Certificate (EHC) issued, the date the application was received, the date of export, the commodity type, the species of animal, any transit countries en route to the destination country and the destination country of export. Where the EHC column contains a reference to 2011/214 or 2011/879 the export is for Intra-union trade to a Member State of the European Union under Council Directives 2009/158/EC (as amended). Where the EHC column contains a reference to 92/65 the export is for Intra-union trade to a Member State of the European Union under Council Directives 92/65/EEC (as amended). These will include Intra-union trade certificates where the final destination was to a Third Country but the live animal transited the EU en route and was therefore required to have Intra-union trade certification issued as well as an EHC. Where the EHC column contains the words 'Non harmonised' the export was to a Member State of the EU but does not fall under any harmonised EU legislation for trade and therefore agreement to export using a Non harmonised EHC was received from the destination Member State.  The dataset is for live animal exports where the loading address was in England only. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, export licence
Organization: Animal and Plant Health Agency
Exotic Animal Import Licences 2013

This dataset covers Import Licences issued by APHA for Live Animals other than dogs, cats and ferrets covered by The Rabies (Importation of Dogs, Cats and Other Mammals) Order 1974 (as amended). The dataset covers both licences for animals to enter quarantine and licences where the need for quarantine has been waived following individual risk assessments by APHA. The dataset also covers the date the application was received, the number and species of animal imported, the country of origin of the animal, the rabies status of the country of origin at the time the licence was issued and also the date the licence was issued. Where no date is entered in column E and F - the date of issue was not recorded by APHA. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, import, import licence
Organization: Animal and Plant Health Agency
Apiary Inspections for Exotic Pests in England - 2014

This dataset provides figures for the number of apiaries and colonies inspected for Exotic pests by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2014, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of Apiaries Inspected; No. of Colonies Inspected (figures for total number inspected, and number of dead colonies inspected); Number of colonies with Small hive beetle; Number of colonies with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Miscellaneous Product Exports 2014

This dataset contains information on export applications for miscellaneous products. Applications registered on this dataset were received either in 2013 with a 2014 date required or received between 2 January 2014 and 30 July 2014. Data post 30 July 2014 is contained in datatset 'Product Exports 2014'. The dataset contains columns for the date the application was received, the Export Health Certificate (EHC) issued, the destination country of the export, the commodity being exported, the date the EHC was required to be with the certifying Official Veterinarian or exporter and if the EHC was cancelled. This dataset is for miscellaneous product exports where the loading address was in England only. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, export licence
Organization: Animal and Plant Health Agency
Foot and Mouth Disease 2001 - Daily Overview Maps - Week Commencing 10.12.2001

Daily maps to show the number of confirmed Foot and Mouth Disease (FMD) cases and Form A (Suspected FMD premises) for GB.  Please note: maps from this time of the outbreak were only compiled to reflect status changes. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, foot and mouth disease
Organization: Animal and Plant Health Agency
Notifiable Disease Investigations in Great Britain 2008-2015 Summary

This dataset contains a list of all exotic disease investigations carried out by the Animal and Plant Health Agency(APHA) in Great Britain between 2008 and 2015.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases in this context are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected.  'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom.  Individual diseases are listed on the left of this table, and years along the top.  Further information and explanation of abbreviations are available at the end of the document.  
Please note: Enzootic Bovine Leukosis and Brucellosis Abortus were the responsibility of the Endemics team within APHA until 2014.  They are therefore only included in these records from 2014 onwards. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Isolations and incidents of Salmonella in deer on all premises in Great Britain, 2010-2014

This dataset shows the total number of Salmonella isolations and incidents in deer on GB Premises from 2010-2014.    The data is grouped by Salmonella subspecies, the numbers of isolations and incidents are given, and the whole is grouped by year.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group of animals on a single occasion.  An 'incident' is the confirmation of the same Salmonella type on one or more occasion within a set time period (usually thirty days), and within the same group of animals or same location.  
The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods 2014

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods 2014.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Negated Notifiable Disease Investigations: Wales 2011

This dataset provides figures for the number of negated Exotic Notifiable Disease investigations carried out in Wales during 2011.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. A report case is negated if after a clinical examination and in some cases further diagnostic testing there is sufficient evidence for the Chief Veterinary Officer(Wales) to negate presence of the disease. This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc. 
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Foulbrood Samples in England - Apiaries - for 2013

This dataset gives figures for the number of American and European foulbrood samples taken from apiaries in English counties during 2013.  The dataset includes the following fields: County Name; No. of different apiaries with AFB (American Foulbrood); No. of different apiaries with EFB (European Foulbrood); No. of different apiaries with Negative samples; Total no. of samples.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Foulbrood Samples in England - Apiaries - for 2009

This dataset gives figures for the number of American and European foulbrood samples taken from apiaries in English counties during 2009.  The dataset includes the following fields: County Name; No. of different apiaries with AFB (American Foulbrood); No. of different apiaries with EFB (European Foulbrood); No. of different apiaries with Negative samples; Total no. of samples.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods 2015

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods 2015.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Conservation Birds Import Licences 2013

This dataset covers Import Licences issued by APHA for Conservation Birds imported from third countries. This dataset contains details of the type of licence issued, the date the licence was issued by APHA, the number and breed of birds being imported, the country of origin and the Border inspection post (BIP) in England through which the birds were imported. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, import, import licence
Organization: Animal and Plant Health Agency
Isolations and incidents of Salmonella in wild mammals on all premises in Great Britain, 2014

This dataset shows the total number of Salmonella isolations and incidents in wild mammals on GB Premises for 2014.    The data is grouped by Salmonella subspecies, the numbers of isolations and incidents are given, and the whole is grouped by year.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group of animals on a single occasion.  An 'incident' is the confirmation of the same Salmonella type on one or more occasion within a set time period (usually thirty days), and within the same group of animals or same location.  The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).   Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.   APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency