AndreaBozzo/ceres-open-data-index huggingface dataset:
Comparisons - imported animal protein contamination rates in Great Britain in 2012 - 2014

This dataset relates to Salmonella in animal feedingstuffs. The data shows a comparison of the testing of batches of imported animal protein for the years 2012, 2013 and 2014. The sample type is sub-categorised, batches are counted and postive results shown.  The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Summary of Unregulated Plant Imports 2010

This dataset provides a summary of Unregulated Imports checks undertaken in 2010.  Plant materials that are not subject to formal phytosantiary controls and which do not have an EU inspection target are described as 'unregulated'.  The Animal and Plant Health Agency's Plant Inspectors check some of these consignments to ensure that there are no new risks or pathways that have been overlooked by the EU regulations.  This dataset includes the fields: Botanical Name, Country of Origin, Year, Number of consignments. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Controlled Plant Goods 2014

This dataset provides a summary of the Import Inspection Statistics for Controlled Plant Goods 2014.  Controlled goods are those  which are subject to formal plant health controls when imported, including the provision of a phytosanitary certificate.  'Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name, Number of consignments, Total weight, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  A 'PHMD' is required where goods are to clear customs in an EU country other than the one in which they landed.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Isolations and incidents of Salmonella in cattle - GB Premises, 2010-2014

This dataset shows the total number of Salmonella isolations and incidents in cattle on GB Premises,  between 2010-2014.  The data is grouped by Salmonella subspecies, the numbers of isolations and incidents are given, and the whole is grouped by year.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group of animals on a single occasion.  An 'incident' is the confirmation of the same Salmonella type on one or more occasion within a set time period (usually thirty days), and within the same group of animals or same location.  
The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Apiary Inspections for Exotic Pests in England - 2013

This dataset provides figures for the number of apiaries and colonies inspected for Exotic pests by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2013, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of Apiaries Inspected; No. of Colonies Inspected (figures for total number inspected, and number of dead colonies inspected); Number of colonies with Small hive beetle; Number of colonies with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Summary of Regulated Plant Imports by Commodity - 2015

This dataset provides a summary of Regulated Imports by Commodity in 2015.  Certain living plant material (e.g. plants for planting, some fruit, vegetables and cut flowers) is subject to formal plant health controls when imported, including the provision of a phytosanitary certificate.  'Phytosanitary Certificates' are produced by APHA (or an overseas equivalent agency) to certify that a plant commodity is healthy prior to export.  These materials are described as 'regulated'.  This dataset includes the fields: Botanical Name, Country of Origin, Year, Total Weight (kg), Number of consignments. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Accident and Incident Data - 2013-2014

This dataset includes the following fields for 2013/2014: Reference (unique reference number); Date of Incident; Type of injury; Time Lost Days. In 2014, the Animal and Plant Health Agency (APHA) changed the reporting requirements for Health & Safety incidents, where 'Time Lost' was recorded as a 'Yes/No' response.  The datasets were drawn from the adverse incident recording system in operation at the time. The systems have been developed and enhanced over time to allow for greater internal analysis and comparisons. As part of its legal duties APHA records all incidents where a person has been harmed during their work or whilst attending APHA premises. In addition, the Agency has been promoting the reporting of any adverse incidents generally known as near misses or hazard observations, which is shown in the increased volume of reports.   Please note: Some of the data has been edited. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Summary of Regulated Plant Imports by Commodity - 2010

This dataset provides a summary of Regulated Imports by Commodity in 2010.  Certain living plant material (e.g. plants for planting, some fruit, vegetables and cut flowers) is subject to formal plant health controls when imported, including the provision of a phytosanitary certificate.  'Phytosanitary Certificates' are produced by APHA (or an overseas equivalent agency) to certify that a plant commodity is healthy prior to export.  These materials are described as 'regulated'.  This dataset includes the fields: Botanical Name, Country of Origin, Year, Total Weight (kg), Number of consignments. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Collection of 22 M. bovis isolates representative of the disease in GB with genotype and deletion analysis.

Analysis of bovine tuberculosis (bTB) genotype frequency  (spoligotype and VNTR type) collated in isolates from the spoligotype database for 2006. The purpose of this collection was to generate a collection of isolates that represented the diversity of major genotypes in GB.  The International Nomenclature for each spoligotype given by www.Mbovis.org (SBXXX), the VLA spoligotype and 6 locus VNTR call (e.g 17:7-5-5-5*-3-3.1), the raw frequency and percentage of the total for each genotype, the translated genotype name (ie 17:a, see APHA0126) as well as the identification code (AF number such as 61/0359/01) is shown.  Subsequently, the representative isolates in the collection were analysed for the presence/absence of specific chromosomal deletions (RDX) that are used to identify sub-lineages of M. bovis. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Cats per square kilometre- upper 95th percentile

This dataset is a modelled dataset, describing an upper estimate of cats per square kilometre across GB. The figures are aligned to the British national grid, with a population estimate provided for each 1km square. These data were generated as part of the delivery of commissioned research. The data contained within this dataset are modelled figures, based on upper 95th percentile national estimates for pet population, and available information on Veterinary activity across GB. The data are accurate as of 01/01/2015. The data provided are summarised to the 1km level.  Further information on this research is available in a research publication by James Aegerter, David Fouracre & Graham C. Smith, discussing the structure and density of pet cat and dog populations across Great Britain. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, pet, research project
Organization: Animal and Plant Health Agency
Cats per square kilometre- lower 95th percentile

This dataset is a modelled dataset, describing a lower estimate of cats per square kilometre across GB. The figures are aligned to the British national grid, with a population estimate provided for each 1km square. These data were generated as part of the delivery of commissioned research. The data contained within this dataset are modelled figures, based on lower 95th percentile national estimates for pet population, and available information on Veterinary activity across GB. The data are accurate as of 01/01/2015. The data provided are summarised to the 1km level.  Further information on this research is available in a research publication by James Aegerter, David Fouracre & Graham C. Smith, discussing the structure and density of pet cat and dog populations across Great Britain. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, pet, research project
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Ware Survey 2015

This dataset provides information on the Potato Cyst Nematode (PCN) survey of land used for ware production during 2015.  The dataset includes the fields: Region, Visit date, Job description,  Sample area (Hectares), Number of samples, Cysts present Y/N, Cysts non viable, Fields non viable cysts, Area non viable cysts, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infected, Combined pallida rostochiensis infected, Area combined pallida rostochiensis. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Beekeeper Inspections and Foulbrood Disease in England for 2014

This dataset provides figures for the number of bee keepers inspected by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2014 and is broken down to county level within England only.  This dataset includes the following fields: Region; County; Number of Beekeepers Inspected; Number of beekeepers receiving a positive American Foulbrood (AFB) diagnosis; Number of beekeepers receiving a positive European Foulbrood (EFB) diagnosis; Percentages (of beekeepers with colonies diagnosed positive for either AFB or EFB).  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Accident and Incident Data - 2012-2013

This dataset includes the following fields for 2012/2013: Reference (unique reference number); Date of Incident; Type of injury; Time Lost Days. The datasets were drawn from the adverse incident recording system in operation at the time. The systems have been developed and enhanced over time to allow for greater internal analysis and comparisons. As part of its legal duties APHA records all incidents where a person has been harmed during their work or whilst attending APHA premises. In addition, the Agency has been promoting the reporting of any adverse incidents generally known as near misses or hazard observations, which is shown in the increased volume of reports.   Please note: Some of the data has been edited. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Surveillance - Positive Results Summary 2011

This dataset provides information on Potato Cyst Nematode (PCN) surveillance, Positive Results Summary, during 2011. The dataset is broken down by region, and includes the fields: PCN+ve (positive for Potato Cyst Nematode), Region, Visit date, Job description, Task, Sample area (Hectares), Cysts non viable, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infected, Combined pallida rostochiensis infected, Area combined pallida rostochiensis infected. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Sampling - Seed Potato Classification Scheme 2012

This dataset provides information on the Potato Cyst Nematode (PCN) sampling for entry into the  Seed Potato Classification Scheme (SPCS) during 2012.  Seed Potatoes are those intended for use as seeds for future crops rather than consumption.  The dataset includes the fields: Visit date, Job description, PCN +ve (positive for PCN), Sample area (Hectares), Number of samples, Cysts present Y/N, Cysts non viable, Fields non viable cysts, Area non viable cysts, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infested, Combined pallida & rostochiensis infested, Area combined pallida & rostochiensis infested. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Negated Notifiable Disease Investigations: England 2015

This dataset provides figures for the number of negated Exotic Notifiable Disease investigations carried out in England during 2015.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom. A report case is negated if after a clinical examination and in some cases further diagnostic testing there is sufficient evidence for the Chief Veterinary Officer to negate presence of the disease. This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result, e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc. 
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Number of confirmed cases of FSE in domestic cats by year of onset

Number of confirmed cases of FSE (Feline Spongiform Ecephalopathy) in domestic cats by year of onset. This dataset includes the following fields: Year of onset (year that symptons of the disease were first noticed); Number of cases. 
Please note: this data is available as part of a wider report on TSE surveillance, published on gov.uk. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, statistics, surveillance
Organization: Animal and Plant Health Agency
Foot and Mouth Disease 2001 - Daily Overview Maps - Week Commencing 17.12.2001

Daily maps to show the number of confirmed Foot and Mouth Disease (FMD) cases and Form A (Suspected FMD premises) for GB.  Please note: maps from this time of the outbreak were only compiled to reflect status changes. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, foot and mouth disease
Organization: Animal and Plant Health Agency
Confirmed Notifiable Disease Cases: England 2012

This dataset provides figures for the number of confirmed Exotic Notifiable Disease investigations carried out by the Animal and Plant Health Agency in England during 2012.  Investigations that follow the report of an exotic notifiable disease are called 'report cases'.  Notifiable diseases in this context are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom.  
This dataset is formatted in two sections: the first provides information on who reported suspicion of disease where a report case was instigated as a result of clinical suspicion; the second half of the spreadsheet identifies why an animal was tested where report cases were started as a result of a non-negative lab result. e.g. as part of an active surveillance programme, or as part of pre-breeding tests, etc.
Disease is confirmed by the Chief Veterinary Officer following an investigation by APHA which includes clinical investigation and laboratory testing.
For further information and explanations of the data included in this dataset, please see the document available for download alongside this dataset titled 'NDI Cases - Additional Information'. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Number of newly affected herds by year of onset of their first confirmed case of BSE in GB (passive cases only)

This dataset shows the number of newly affected herds by year of onset of their first confirmed case of BSE (Bovine Spongiform Encephalopathy) in Great Britain (passive cases only). The dataset includes the following fields: Year of onset; Number of herds with at least one homebred case (animal born and raised on the same farm); Number of herds with purchased animals only; Total herds. 
Please note: this data is available as part of a wider report on TSE surveillance, published on gov.uk. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, statistics, surveillance
Organization: Animal and Plant Health Agency
Foot and Mouth Disease 2001 - Daily Overview Maps - Week Commencing 24.12.2001

Daily maps to show the number of confirmed Foot and Mouth Disease (FMD) cases and Form A (Suspected FMD premises) for GB.  Please note: maps from this time of the outbreak were only compiled to reflect status changes. Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, foot and mouth disease
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods 2012

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods 2012.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency