AndreaBozzo/ceres-open-data-index huggingface dataset:
Apiary Inspections and Foulbrood Disease in England for 2011

This dataset provides figures for the number of apiaries inspected by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  An 'apiary' is defined as the physical dwelling place of a single colony or multiple colonies of honeybees.  The dataset gives figures for inspections carried out during 2011, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; Apiaries Inspected; Number of apiaries receiving a positive American Foulbrood (AFB) diagnosis; Number of apiaries receiving a positive European Foulbrood (EFB) diagnosis; Percentages (of apiaries infected with either AFB or EFB).  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Apiary Inspections for Exotic Pests in England - 2015

This dataset provides figures for the number of apiaries and colonies inspected for Exotic pests by Bee Inspectors from the National Bee Unit (NBU), part of the Animal and Plant Health Agency (APHA).  The dataset gives figures for inspections carried out during 2015, and is broken down to county level within England only.  This dataset includes the following fields: Region; County; No. of Apiaries Inspected; No. of Colonies Inspected (figures for total number inspected, and number of dead colonies inspected); Number of colonies with Small hive beetle; Number of colonies with Tropilaelaps.  Please note: this dataset has been drawn from a live database available via the NBU website.  This is a dynamic system, which has been sampled here at a single point in time, but which reflects system amendments/data updates in the 'live' environment.  This could cause the data to change over time, as data is updated or amended retrospectively.  County data is reflective of the counties stored in BeeBase, and may not necessarily reflect current recognised counties/unitary authorities.  Neither Small hive beetle nor Tropilaelaps mites have been confirmed in the UK to date. Attribution statement: ©Crown Copyright

Tags: bee, environment
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Surveillance - Positive Results Summary 2014

This dataset provides information on Potato Cyst Nematode (PCN) surveillance, Positive Results Summary, during 2014. The dataset is broken down by region, and includes the fields: PCN+ve (positive for Potato Cyst Nematode), Region, Visit date, Job description, Task, Sample area (Hectares), Cysts non viable, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infected, Combined pallida rostochiensis infected, Area combined pallida rostochiensis infected. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Reduced Plant Goods by Point of Entry 2015

This dataset provides a summary of the Import Inspection statistics for Reduced Goods by Point of Entry (POE) 2015.  Reduced goods are those where inspections are permitted at a less than 100% rate, becuase they are considered to be low risk imports.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name Variety/Type and Country of Origin, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Reduced % Jan - Dec 2015, Reduced % Oct - Dec 2014, Reduced % Jan - Dec 2014, Reduced % Jan - Dec 2013 (these were the required check levels for these calendar periods), Reduced inspection rate, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Isolations and incidents of Salmonella in pheasants on all premises in Great Britain, 2010-2014

This dataset shows the total number of Salmonella isolations and incidents in pheasants on GB Premises from 2010-2014.    The data is grouped by Salmonella subspecies, the numbers of isolations and incidents are given, and the whole is grouped by year.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group of animals on a single occasion.  An 'incident' is the confirmation of the same Salmonella type on one or more occasion within a set time period (usually thirty days), and within the same group of animals or same location.  The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).   Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.   APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Dog population per postcode district (lower 95th percentile)

This dataset is a modelled dataset, describing the predicted population of dogs per postcode district (e.g. YO41). This dataset gives the lower estimate for population for each district, and was generated as part of the delivery of commissioned research. The data contained within this dataset are modelled figures, based on lower 95th percentile national estimates for pet population, and available information on Veterinary activity across GB. The data are accurate as of 01/01/2015. The data provided are summarised to the postcode district level.  Further information on this research is available in a research publication by James Aegerter, David Fouracre & Graham C. Smith, discussing the structure and density of pet cat and dog populations across Great Britain. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, pet, research project
Organization: Animal and Plant Health Agency
Salmonella isolations in cattle, sheep, pigs and poultry - GB Premises 2010-2014

This dataset shows the total number of Salmonella isolations in cattle, sheep, pigs and poultry on GB Premises,  between 2010-2014.  The data is grouped by Salmonella subspecies, and by year.  'Poultry' in this instance includes chickens, turkeys, and ducks.  An 'isolation' is defined as the first report of a salmonella isolate (cultured instance of Salmonella from a sample) from a known group of animals on a single occasion.
The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods by Point of Entry 2011

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods by Point of Entry (POE) 2011.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields:  Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate),  Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Exotic Notifible Disease Report Case Reported by Who Vocabulary

This dataset provides a codelist for the person or organisation that reported suspicion of an Exotic Notifiable Disease. These investigations are carried out by the Animal and Plant Health Agency. Investigations that follow the report of an exotic notifiable disease are called 'report cases'. Notifiable diseases in this context are animal diseases that an animal owner/keeper is under legal obligation to report to the Animal and Plant Health Agency (APHA), even if there is only a suspicion that an animal may be affected. 'Exotic diseases' are defined as diseases that are not currently present within the United Kingdom.
Reported by Who refers to the origin of the report. These are:
Owner: Owner of the Livestock or Livestock Keeper
PVS: Private Veterinary Surgeon 
Lab Vet: A Veterinary Pathologist working in government laboratory 
OV(SH): An Official Veterinarian working in a slaughter house 
Police: On duty policeman
Trading Standards: Trading Standards Inspector
Egg Market Inspector: Egg Market Inspector
Healthcare Professional: Healthcare Professional
Other: Any other person or body which not included above.
For Non Negative Lab Results the options are
APHA Weybridge: for results reported from Weybridge Laboratory
Pirbright: for results reported from the Pirbright Institute 
Private Lab: for results reported from a non government lab
Other: for results reported elsewhere typically an importing countries government lab Attribution statement: ©Crown Copyright, APHA 2016

Tags: animal disease, environment, surveillance
Organization: Animal and Plant Health Agency
Summary of Regulated Plant Imports by Commodity - 2013

This dataset provides a summary of Regulated Imports by Commodity in 2013.  Certain living plant material (e.g. plants for planting, some fruit, vegetables and cut flowers) is subject to formal plant health controls when imported, including the provision of a phytosanitary certificate.  'Phytosanitary Certificates' are produced by APHA (or an overseas equivalent agency) to certify that a plant commodity is healthy prior to export.  These materials are described as 'regulated'.  This dataset includes the fields: Botanical Name, Country of Origin, Year, Total Weight (kg), Number of consignments. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Cats per household per postcode district- upper 95th percentile

This dataset is a modelled dataset, describing the upper estimate of cat ownership characteristics per household at a postcode district  level(e.g. YO41). This dataset gives the mean household owership rate for each district, and was generated as part of the delivery of commissioned research. The data contained within this dataset are modelled figures, based on upper 95th percentile national estimates for pet population, and available information on Veterinary activity across GB. The data are accurate as of 01/01/2015. The data provided are summarised to the postcode district level.  Further information on this research is available in a research publication by James Aegerter, David Fouracre & Graham C. Smith, discussing the structure and density of pet cat and dog populations across Great Britain. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, pet, research project
Organization: Animal and Plant Health Agency
Accident and Incident Data - 2011-2012

This dataset includes the following fields for 2011/2012: Reference (unique reference number); Date Safety Unit received incident form; Type of injury accident category; Time Lost Days. The datasets were drawn from the adverse incident recording system in operation at the time. The systems have been developed and enhanced over time to allow for greater internal analysis and comparisons. As part of its legal duties APHA records all incidents where a person has been harmed during their work or whilst attending APHA premises. In addition, the Agency has been promoting the reporting of any adverse incidents generally known as near misses or hazard observations, which is shown in the increased volume of reports.  Please note: Some of the data has been edited. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency
Nalidixic acid resistance in Salmonella Typhimurium DT104 from domestic livestock in 2001 - 2014

The data shows  nalidixic acid antimicobrial resistance in phage type DT104 of Salmonella Typhimurium from cattle, sheep, pigs, chickens, turkeys and ducks over the period 2001 - 2014. The data is grouped by year, with totals of cultures tested and their percentage resistance to trimethoprim/sulphonamide.  Phage typing of Salmonella further subcategorises Salmonella serotypes. The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Reduced Plant Goods 2010

This dataset provides a summary of the Import Inspection statistics for Reduced Goods 2010.  Reduced goods are those for which inspections are permitted at a less than 100% rate, becuase they are considered to be low risk imports.  This dataset includes the fields: Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate), Botanical Name Variety/ Type and Country of Origin, Number of Consignments, Plant Health Movement Document (PHMD) Supplied?, Consignment Corrected Total for PHMD, Inspection Count, Inspected %, Reduced % Jan - Dec 2016, Reduced % Jan - Dec 2015, Reduced % Oct - Dec 2014, Reduced % Jan - Dec 2014, Reduced % Jan - Dec 2013 (these were the required check levels for these calendar periods), eDomero Reduced Check Rate, Document Check Count, Doc %, ID Check Count, ID Check %, Failed Physical, Failed Physical %, Failed Doc, Failed Doc %, Failed ID, Failed ID %, Total Failed, Total Failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Salmonella serovars reported from animal feedingstuff ingredients and products associated with the ABPR in GB 2012 - 2014

This data lists and counts the Salmonella serovar isolations (2012-2014) obtained from testing ingredients and products in relation to the Animal By-Products Regulations.  An 'isolation' is defined as the first report of a salmonella isolate (a cultured instance of Salmonella from a sample) from a known group on a single occasion.  The laboratory facilities are UKAS accredited to BS EN ISO 17025:2000 (Lab Nos. 0941, 1769 and 2112) for an extensive range of tests supported by proficiency testing accredited to ISO/IEC Guide 43-1 1997 (Lab No. 0004).  APHA is certificated to BS EN ISO 9001:2000 for ‘the provision of a range of specialist veterinary scientific services to the Government and other interested parties worldwide’ (Certificate Nos. LRQ 4000436, 4001071, 0962413 and 4001392).
Additionally, APHA holds Good Laboratory Practice and Good Manufacturing Practice approval and complies with the Joint Code of Practice for Research projects and Good Clinical Veterinary Practice quality standards.
APHA Weybridge is accredited to BS EN ISO 14001:2004 for environmental management system. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, salmonella, surveillance
Organization: Animal and Plant Health Agency
Products of Animal Origin Import Licences for Research Purposes 2013

This dataset covers licences issued by APHA for the import of products of animal origin (apart from Fish and Honey Products up to 16 July 2014) imported for research purposes. The dataset covers the date the application was received, the country of origin of the product, the amount of product imported, port of entry in England, the validity period of the licence and the date APHA issued the licence. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, import, import licence
Organization: Animal and Plant Health Agency
Potato Cyst Nematode Ware Survey 2013

This dataset provides information on the Potato Cyst Nematode (PCN) survey of land used for ware production during 2013.  The dataset includes the fields: Region, Visit date, Job description,  Sample area (Hectares), Number of samples, Cysts present Y/N, Cysts non viable, Fields non viable cysts, Area non viable cysts, Cysts viable globodera pallida, Cysts viable globodera rostochiensis, Pallida infested, Area pallida infested, Rostochiensis infested, Area rostochiensis infected, Combined pallida rostochiensis infected, Area combined pallida rostochiensis. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
Number of TSEs in exotic species by year reported

Number of TSEs (Transmissible Spongiform Encephalopathies) in exotic species by year reported since 1988.  This dataset includes the fields: Year (year case reported to APHA); Number (of cases). Includes a small number of cases not presented as BSE suspects but identified at post mortem examination. 
Please note: this data is available as part of a wider report on TSE surveillance, published on gov.uk. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, statistics, surveillance
Organization: Animal and Plant Health Agency
Summary of Inspection Statistics - Mandatory Plant Goods by Point of Entry 2010

This dataset provides a summary of the Import Inspection Statistics for Mandatory Goods by Point of Entry (POE) 2010.  Mandatory goods are those which require phytosanitary certificates ('Phytosanitary Certificates' are produced by plant health authorities to certify that a plant commodity is healthy prior to export).  Mandatory goods have a 100% inspection rate, as they are considered to be 'high risk' materials.  This dataset includes the fields:  Type of Inspection (Mandatory - 100% inspection rate for high risk material; Controlled - where the commodity is subject to regulated inspections; Reduced - low-risk import goods for which inspections are permitted at a less than 100% rate),  Botanical Name, Number of consignments, Plant Health Movement Document (PHMD) supplied?, Consignment corrected total for PHMD, Inspection count, Inspected %, Document check count, Doc %, ID check count, ID check %, Failed physical, Failed physical %, Failed doc, Failed doc %, Failed ID, Failed ID %, Total failed, Total failed %.  Percentage figures shown are for the reporting period indicated, and deonte the percentage of checks done on a named commodity for the reporting period. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment, export, import, plant species, surveillance
Organization: Animal and Plant Health Agency
National Control Plan for Salmonella Chicken Breeder Flocks Operator Sampled England 2015

This dataset details the chicken breeder flocks in England where official routine sampling, under the National Control Programmes for Salmonella, was carried out by Animal and Plant Health Agency staff in 2015. The dataset details region, the date of the sampling visit, flock type, the number of flocks sampled for salmonella and the result. Attribution statement: ©Crown Copyright, APHA 2016

Tags: environment
Organization: Animal and Plant Health Agency