AndreaBozzo/ceres-open-data-index huggingface dataset:
iTrack Oysters September 2023 Experiment - Environmental and Oyster Health Data

This data package is a component of the Hakai Institute’s Marna Wet Lab and Caren Helbing (University of Victoria, UVic) collaborative iTrack project investigating environmental effects on eDNA and eRNA. Hakai Institute's Marna Wet Lab experimental research program uses laboratory experiments to evaluate marine organisms' responses to simulated current and future ocean environmental conditions. The overarching objective of Hakai Wet Lab experimental research is to investigate the mechanisms of vulnerability and resilience of a variety of marine species and communities under static or dynamic future environmental conditions, and understand how organisms are responding phenotypically, physiologically and/or genomically to thermal and acidification stress.

This experiment was part two of a series of mesocosm experiments and took place at the Marna Wet Lab at Hakai’s Quadra Island Ecological Observatory September 19-28, 2023. The purpose of this experiment was to investigate eDNA and eRNA production and degradation of adult Pacific oysters (Crassostrea gigas) under different pCO2 and temperature conditions. Oysters were exposed to various temperatures (10oC and 20oC) and pCO2 concentrations (avg. 735 µatm and 1540 µatm), resulting in four distinct temperature/pCO2 treatments. One tank per temperature/pCO2 treatment combination contained no oysters to serve as a control. The oysters were destructively sampled for weight, size, ability to close valves, tissue condition, mantle recession, conchiolin deposits, lesions, digestive gland colouration, and gill and gonad DNA.

This data package contains the mesocosm temperature and carbonate chemistry data and oyster health data only and will be available upon request until the manuscript has been accepted at which time the data will be made publicly available. 

In light of the effort required to obtain these data and create data packages, we request all data users that, in addition to following the CC-BY license terms, they give attribution to the data providers and follow fair use guidelines: 1) respect the data providers, and provide helpful feedback on data quality, and 2) communicate and/or collaborate with Hakai Marna Wet Lab researchers and collaborators if you are considering using this dataset for manuscripts or other forms of reporting.

Organization: CIOOS-Pacific
Barkley Canyon Mid-East Conductivity Temperature Depth Deployed 2021-08-21

The Sea-Bird SeaCAT SBE19plus V2 6002 was deployed on 2021-08-21 at Barkley Canyon Mid-East. Barkley Canyon Mid-East is a location in Barkley Canyon near a canyon wall. At this location, benthic processes, biodiversity, and sediment dynamics are observed. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Baynes Sound Conductivity Temperature Depth Deployed 2022-08-03

The Sea-Bird SeaCAT SBE19plus V2 5047 was deployed on 2022-08-03 at Baynes Sound. Baynes Sound is located between Denman Island and Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Strait of Georgia Central Oxygen Sensor Deployed 2023-11-17

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 632209 was deployed on 2023-11-17 at Strait of Georgia Central. Strait of Georgia Central is a central area in the Strait of Georgia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Barkley Canyon Mid-East Fluorometer Turbidity Deployed 2013-05-14

The WET Labs ECO FLNTURTD 2973 was deployed on 2013-05-14 at Barkley Canyon Mid-East. Barkley Canyon Mid-East is a location in Barkley Canyon near a canyon wall. At this location, benthic processes, biodiversity, and sediment dynamics are observed. This device is a Fluorometer Turbidity. Fluorometer Turbidity instruments measure chlorophyll fluorescence and turbidity within the same volume of seawater. The instrument uses a light emitting diode (LED) to provide an excitation source. The fluoresced light is received by a detector at a particular angle from the LED source, and uses an interference filter to discriminate against scattered excitation light. Turbidity is measured at the same time, by detecting scattered light from a LED, which is positioned at the same angle as the chlorophyll fluorescence. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Juan de Fuca Strait Oxygen Sensor Deployed 2019-05-29

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 630193 was deployed on 2019-05-29 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Saanich Inlet Sill Oxygen Sensor Deployed 2019-11-01

The SeaBird 43 Oxygen (S/N 1807) was deployed on 2019-11-01 at Saanich Inlet Sill. Saanich Inlet Sill is a shallow bottom feature in the Saanich Inlet. The sill influences flow of oxygenated water and seasonal cycles. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Strait of Georgia East Oxygen Sensor Deployed 2011-12-12

The Aanderaa Optode 4175 (S/N 579) was deployed on 2011-12-12 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Strait of Georgia East Fluorometer Turbidity Deployed 2023-03-17

The WET Labs ECO FLNTUS 4669 was deployed on 2023-03-17 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Fluorometer Turbidity. Fluorometer Turbidity instruments measure chlorophyll fluorescence and turbidity within the same volume of seawater. The instrument uses a light emitting diode (LED) to provide an excitation source. The fluoresced light is received by a detector at a particular angle from the LED source, and uses an interference filter to discriminate against scattered excitation light. Turbidity is measured at the same time, by detecting scattered light from a LED, which is positioned at the same angle as the chlorophyll fluorescence. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
ODP 1026 Oxygen Sensor Deployed 2014-05-23

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 630111 was deployed on 2014-05-23 at ODP 1026. ODP 1026 is a borehole site used to pinpoint an area within Cascadia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Saanich Inlet Sill Oxygen Sensor Deployed 2013-04-29

The Aanderaa Optode 4175C (S/N 1685) was deployed on 2013-04-29 at Saanich Inlet Sill. Saanich Inlet Sill is a shallow bottom feature in the Saanich Inlet. The sill influences flow of oxygenated water and seasonal cycles. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Barkley Canyon Axis Conductivity Temperature Depth Deployed 2024-06-25

The Sea-Bird SeaCAT SBE19plus V2 6002 was deployed on 2024-06-25 at Barkley Canyon Axis. Barkley Canyon Axis is located within Barkley Canyon, where benthic processes, biodiversity, sediment dynamics are observed. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Patricia Bay Oxygen Sensor Deployed 2010-02-20

The Aanderaa Optode 4175 (S/N 579) was deployed on 2010-02-20 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Strait of Georgia Central Conductivity Temperature Depth Deployed 2009-09-28

The Sea-Bird SeaCAT SBE16plus 5047 was deployed on 2009-09-28 at Strait of Georgia Central. Strait of Georgia Central is a central area in the Strait of Georgia. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Chatham Sound Meteorological Station Deployed 2017-04-07

The Lufft WS501 (S/N 226.1216.1009.223) Weather Station was deployed on 2017-04-07 at Chatham Sound. Chatham Sound is a sound on the North Coast of British Columbia, located between Dundas and Stephens Islands and the Tsimpsean Peninsula near Prince Rupert. This device is a Meteorological Station. Meteorological stations are instruments that make routine meteorological measurements on the atmosphere and are comprised of a suite of sensors. Typical examples of measurements include temperature, barometric pressure, humidity, rainfall, solar radiation, wind speed and direction. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Barkley Canyon Hydrates Oxygen Sensor Deployed 2018-08-01

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 631893 was deployed on 2018-08-01 at Barkley Canyon Hydrates. Barkley Canyon Hydrates denotes a gas hydrate field within Barkley Canyon. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Juan de Fuca Strait Current Meter Deployed 2017-06-15

The Nortek Aquadopp Current Meter A3L5377 AQD8386 was deployed on 2017-06-15 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current meters have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Juan de Fuca Strait Oxygen Sensor Deployed 2015-09-13

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 630191 was deployed on 2015-09-13 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Odysseus Oxygen Sensor Deployed 2022-05-17

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 631868 was deployed on 2022-05-17 on Odysseus. This Remotely Operated Vehicle is owned by Pelagic Research Services. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a mobile platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Discovery Passage Fluorometer Deployed 2024-03-19

The WET Labs ECO FLRT 5957 was deployed on 2024-03-19 at Discovery Passage. Discovery Passage is a channel that is part of Inside Passage. It is located between Vancouver Island and the Discovery Islands and north of the Georgia Strait. This device is a Fluorometer. Fluorometers measure the amount of stimulated electromagnetic radiation (fluorescence) produced by pulses of electromagnetic radiation emitted into the water column. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Endeavour North Current Meter Deployed 2021-08-28

The Nortek Aquadopp Current Meter A2L2558 AQD2334 was deployed on 2021-08-28 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current meters have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Baynes Sound Oxygen Sensor Deployed 2022-08-03

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 632516 was deployed on 2022-08-03 at Baynes Sound. Baynes Sound is located between Denman Island and Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Juan de Fuca Strait Oxygen Sensor Deployed 2019-10-18

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 630191 was deployed on 2019-10-18 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Strait of Georgia Central Oxygen Sensor Deployed 2018-05-18

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 631533 was deployed on 2018-05-18 at Strait of Georgia Central. Strait of Georgia Central is a central area in the Strait of Georgia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Endeavour South Conductivity Temperature Depth Deployed 2019-09-20

The Sea-Bird Microcat SBE37SIP 8465 was deployed on 2019-09-20 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Baynes Sound Oxygen Sensor Deployed 2021-07-15

The Sea-Bird SBE 63 Dissolved Oxygen Sensor 630438 was deployed on 2021-07-15 at Baynes Sound. Baynes Sound is located between Denman Island and Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Juan de Fuca Strait Conductivity Temperature Depth Deployed 2018-08-04

The Sea-Bird Microcat SBE37SMP-ODO 9532 was deployed on 2018-08-04 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific
Folger Pinnacle Conductivity Temperature Depth Deployed 2019-07-03

The Sea-Bird SeaCAT SBE19plus V2 7589 was deployed on 2019-07-03 at Folger Pinnacle. Folger Pinnacle is an isolated pillar-like feature in Folger Passage, where biodiversity and coastal ecosystems are observed. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.

Organization: CIOOS-Pacific