AndreaBozzo/ceres-open-data-index huggingface dataset:
Angus Sequence Data: Animal 24266

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 24266.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WB08_i5-515_i7-116_S20_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WB08_i5-515_i7-116_S20_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB08-i5-515-i7-116_S156_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB08-i5-515-i7-116_S156_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB08-i5-515-i7-116_S20_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB08-i5-515-i7-116_S20_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB08-i5-515-i7-116_S20_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB08-i5-515-i7-116_S20_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB08_i5-515_i7-116_S20_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB08_i5-515_i7-116_S20_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB08_i5-515_i7-116_S20_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB08_i5-515_i7-116_S20_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB08_i5-515_i7-116_S375_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB08_i5-515_i7-116_S375_L002_R2_001.fastq.gz</li></ul><p><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 44982

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 44982.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection" target="_blank">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S163_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S163_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S27_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S27_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC03-i5-515-i7-123_S27_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC03-i5-515-i7-123_S27_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC03_i5-515_i7-123_S382_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC03_i5-515_i7-123_S382_L002_R2_001.fastq.gz</li></ul><p dir="ltr"><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 44883

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 44883.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a> . In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S162_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S162_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S26_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S26_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC02-i5-515-i7-122_S26_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC02-i5-515-i7-122_S26_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC02_i5-515_i7-122_S381_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC02_i5-515_i7-122_S381_L002_R2_001.fastq.gz</li></ul><p dir="ltr"><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20816

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20816.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a> . In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WB05_i5-515_i7-113_S17_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WB05_i5-515_i7-113_S17_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB05-i5-515-i7-113_S153_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB05-i5-515-i7-113_S153_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB05-i5-515-i7-113_S17_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB05-i5-515-i7-113_S17_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB05-i5-515-i7-113_S17_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB05-i5-515-i7-113_S17_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB05_i5-515_i7-113_S17_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB05_i5-515_i7-113_S17_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB05_i5-515_i7-113_S17_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB05_i5-515_i7-113_S17_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB05_i5-515_i7-113_S372_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB05_i5-515_i7-113_S372_L002_R2_001.fastq.gz</li></ul><p dir="ltr"><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20834

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20834.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection" target="_blank">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WB06_i5-515_i7-114_S18_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WB06_i5-515_i7-114_S18_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB06-i5-515-i7-114_S154_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB06-i5-515-i7-114_S154_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB06-i5-515-i7-114_S18_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB06-i5-515-i7-114_S18_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB06-i5-515-i7-114_S18_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB06-i5-515-i7-114_S18_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB06_i5-515_i7-114_S18_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB06_i5-515_i7-114_S18_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB06_i5-515_i7-114_S18_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB06_i5-515_i7-114_S18_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB06_i5-515_i7-114_S373_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB06_i5-515_i7-114_S373_L002_R2_001.fastq.gz</li></ul><p><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20598

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20598.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WA11_i5-515_i7-107_S11_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WA11_i5-515_i7-107_S11_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA11-i5-515-i7-107_S11_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA11-i5-515-i7-107_S11_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA11-i5-515-i7-107_S147_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA11-i5-515-i7-107_S147_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA11-i5-515-i7-107_S11_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA11-i5-515-i7-107_S11_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA11_i5-515_i7-107_S11_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA11_i5-515_i7-107_S11_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA11_i5-515_i7-107_S11_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA11_i5-515_i7-107_S11_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA11_i5-515_i7-107_S366_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA11_i5-515_i7-107_S366_L002_R2_001.fastq.gz</li></ul><p dir="ltr"><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20545

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20545.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containng 14 files. the files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WA09_i5-515_i7-105_S9_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WA09_i5-515_i7-105_S9_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA09-i5-515-i7-105_S145_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA09-i5-515-i7-105_S145_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA09-i5-515-i7-105_S9_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA09-i5-515-i7-105_S9_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA09-i5-515-i7-105_S9_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA09-i5-515-i7-105_S9_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA09_i5-515_i7-105_S9_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA09_i5-515_i7-105_S9_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA09_i5-515_i7-105_S9_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA09_i5-515_i7-105_S9_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA09_i5-515_i7-105_S364_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA09_i5-515_i7-105_S364_L002_R2_001.fastq.gz</li></ul><p></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20774

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20774.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WB02_i5-515_i7-110_S14_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WB02_i5-515_i7-110_S14_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB02-i5-515-i7-110_S14_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB02-i5-515-i7-110_S14_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB02-i5-515-i7-110_S150_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WB02-i5-515-i7-110_S150_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB02-i5-515-i7-110_S14_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WB02-i5-515-i7-110_S14_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB02_i5-515_i7-110_S14_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB02_i5-515_i7-110_S14_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB02_i5-515_i7-110_S14_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WB02_i5-515_i7-110_S14_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB02_i5-515_i7-110_S369_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WB02_i5-515_i7-110_S369_L002_R2_001.fastq.gz</li></ul><p><br></p><p><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20658

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20658.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WA12_i5-515_i7-108_S12_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WA12_i5-515_i7-108_S12_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA12-i5-515-i7-108_S12_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA12-i5-515-i7-108_S12_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA12-i5-515-i7-108_S148_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA12-i5-515-i7-108_S148_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA12-i5-515-i7-108_S12_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA12-i5-515-i7-108_S12_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA12_i5-515_i7-108_S12_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA12_i5-515_i7-108_S12_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA12_i5-515_i7-108_S12_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA12_i5-515_i7-108_S12_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA12_i5-515_i7-108_S367_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA12_i5-515_i7-108_S367_L002_R2_001.fastq.gz</li></ul><p><br></p><p><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 45109

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 45109.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WC06_i5-515_i7-126_S30_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WC06_i5-515_i7-126_S30_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC06-i5-515-i7-126_S166_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC06-i5-515-i7-126_S166_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC06-i5-515-i7-126_S30_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WC06-i5-515-i7-126_S30_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC06-i5-515-i7-126_S30_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WC06-i5-515-i7-126_S30_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC06_i5-515_i7-126_S30_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC06_i5-515_i7-126_S30_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC06_i5-515_i7-126_S30_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WC06_i5-515_i7-126_S30_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC06_i5-515_i7-126_S385_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WC06_i5-515_i7-126_S385_L002_R2_001.fastq.gz</li></ul><p dir="ltr"><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture
Angus Sequence Data: Animal 20587

<p dir="ltr">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.</p><p dir="ltr">The National Animal Germplasm Program has germplasm for this animal, with the repository number 20587.</p><p dir="ltr">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href="https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir="ltr">Resources in this dataset:</p><p dir="ltr">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WA10_i5-515_i7-106_S10_L003_R1_001.fastq.gz<br>RAPiD-Genomics-F114-CSU-136201-P001-WA10-i5-515-i7-106_S10_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WA10_i5-515_i7-106_S10_L003_R2_001.fastq.gz<br>RAPiD-Genomics_F115_CSU_136201_P001_WA10_i5-515_i7-106_S10_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA10-i5-515-i7-106_S10_L001_R1_001.fastq.gz<br>RAPiD-Genomics_F115_CSU_136201_P001_WA10_i5-515_i7-106_S10_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA10-i5-515-i7-106_S10_L001_R2_001.fastq.gz<br>RAPiD-Genomics_F115_CSU_136201_P001_WA10_i5-515_i7-106_S10_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA10-i5-515-i7-106_S146_L002_R1_001.fastq.gz<br>RAPiD-Genomics_F115_CSU_136201_P001_WA10_i5-515_i7-106_S10_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA10-i5-515-i7-106_S146_L002_R2_001.fastq.gz<br>RAPiD-Genomics_F116_CSU_136201_P001_WA10_i5-515_i7-106_S365_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA10-i5-515-i7-106_S10_L003_R1_001.fastq.gz<br>RAPiD-Genomics_F116_CSU_136201_P001_WA10_i5-515_i7-106_S365_L002_R2_001.fastq.gz</li></ul><p><br></p><p><br></p>

Tags: animals, ars, cryopreservation, data-gov, dna-sequence, genetic-diversity, germplasm, grin, np101
Organization: Department of Agriculture