AndreaBozzo/ceres-open-data-index huggingface dataset:
Water Depth and acoustic backscatter data collected from NOAA Ship Nancy Foster in the US Caribbean/ Puerto Rico and St. Thomas from 2016-04-07 to 2016-04-26 (NCEI Accession 0157612)

NOAA's NOS/NCCOS/CCMA Biogeography Team, in collaboration with NOAA Ship Nancy Foster, federal, academic, and private sector partners conducted the 2016 Seafloor Mapping of the US Caribbean project. Several areas of interest were explored and surveyed during the field mission in the eastern Puerto Rico region. H12935 was conducted on along the southeastern Puerto Rican shelf edge using a deep water Em 710 multibeam echo sounder (mbes) at 100khz. H12936 was conducted north of the Isla de Culebra over the broad moderately shallow insular shelf using a 400 khz Reson 7125 mbes. A third opportunistic survey was conducted along the edge of the USVI insular shelf south of St. Thomas to conjoin previous NOAA Ship Nancy Foster mission surveys. During the field mission, a Remotely Operated Vehicle owned by the University of North Carolina collected HD photo and video ground validation video. Data was processed by a NOAA contractor using CARIS HIPS software. Data has all correctors applied (attitude, sound velocity) and has been reduced to mean lower low water (MLLW) using final approved tides from NOAA COOPS. Data is spatially referenced in UTM Zone 20 North, Datum WGS84. The project was conducted to meet IHO order 1 and 2 accuracy standards, dependent on the project area and depth. All users should individually evaluate the suitability of this data according to their own needs and standards.

Tags: 463, 7125, 7r3m9r, acoustic, aquatic habitat, atlantic ocean, backscatter, bathymetry, bathymetry/seafloor topography, benthic, biogeography, biosphere, caribbean sea, caribbean sea /north atlantic ocean, coral, country/territory, culebra, description, earth science, em710, essential fish habitat, geographic information, geospatial, geotiff, gis, h12935, h12936, habitat, habitat mapping, insular shelf, integrated ocean and coastal mapping, iocm, kongsberg, leeward islands, m-i907-nf-16, mapping essential fish habitat in the us caribbean to inform mpa management, marine spatial ecology, mbes, multibeam, nancy foster, nf16, noaa, ocean basin, oceanography, oceans, ponce, puerto rico, puerto rico (18n066w0000), raster, reef, reef habitat, remote sensing, reson, seafloor mapping, seafloor mapping of the us caribbean, sonar, south bank, st. thomas, st. thomas (18n064w0033), u. s. virgin islands, united states of america, usvi, virgin islands
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Current meter and CTD data from ALPHA HELIX and THOMAS G. THOMPSON in the Bering Sea, Chukchi Sea, Gulf of Alaska, and North Pacific Ocean from 1987-07-21 to 1988-05-15 (NCEI Accession 8800236)

This dataset includes currents data from current meters in the Bering Sea, collected by Dr. H.J. Niebauer of the Institute of Marine Science. The meters were deployed and recovered during R/V Alpha Helix cruise HX112. This dataset also includes CTD data collected aboard the R/V Thompson on cruise number TT213 in the Bering Sea and Chukchi Sea area between 21-Jul-1987 to 10-Aug-1987 by L. Coachman of the University of Washington, Dept. of Oceanography, CTD data collected aboard the R/V Thompson on cruise number TT214 in the Bering Sea and Chukchi Sea area between 17-Aug-1987 and 29-Jul-1987 by C.P. McRoy of the Institute of Marine Science,  CTD data collected aboard the R/V Alpha Helix in the Gulf of Alaska on cruise number HX108 between 30-Nov-1987 and 13-Dec-1987 and cruise number HX114 between 16-Jun-1988 and 29-Jun-1988 by Dr. T.C. Royer of the Institute of Marine Science. Data has been processed by NODC to the NODC standard F015- Current Meter Data and F022- CTD High Resolutions formats.

The F015 format is used for time series measurements of ocean currents. These data are obtained from current meter moorings and represent Eulerian method of current measurement, i.e., the meters are deployed at a fixed point and measure flow past a sensor. Position, bottom depth, sensor depth, and meter characteristics are reported for each station. The data record comprises values of east-west (u) and north-south (v) current vector components at specified date and time. Current direction is defined as the direction toward which the water is flowing with positive directions east and north and negative directions west and south. Data values may be subject to averaging or filtering and are typically reported at 10-15 minute time intervals. Water temperature, pressure, and conductivity or salinity may also be reported. A text record is available for optional comments.

The F022 format contains high-resolution data collected using CTD (conductivity-temperature-depth) and STD (salinity-temperature-depth) instruments. As they are lowered and raised in the oceans, these electronic devices provide nearly continuous profiles of temperature, salinity, and other parameters. Data values may be subject to averaging or filtering or obtained by interpolation and may be reported at depth intervals as fine as 1m. Cruise and instrument information, position, date, time and sampling interval are reported for each station. Environmental data at the time of the cast (meteorological and sea surface conditions) may also be reported. The data record comprises values of temperature, salinity or conductivity, density (computed sigma-t), and possibly dissolved oxygen or transmissivity at specified depth or pressure levels. Data may be reported at either equally or unequally spaced depth or pressure intervals. A text record is available for comments.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
High-resolution CTD/STD data from ENDEAVOR in the North Atlantic Ocean from 1990-06-24 to 1990-07-07 (NCEI Accession 9300107)

The Conductivity, Temperature and Depth (CTD) and other data were collected in NW Atlantic (limit-40 W). Data was collected from Ship ENDEAVOR cruise 214. The data was collected over a period spanning from June 24, 1990 to July 7, 1990. Data was submitted in a tape by Dr. Robert Pickart, Woods Hole Oceanographic Institution, Woods Hole, MA. Data has been processed and is available in F022-CTD-Hi Resolution file format of NODC.

F022 High-resolution CTD data is collected from high resolution (conductivity-temperature-depth) instruments. As they are lowered and raised in the oceans, these electronic devices provide nearly continuous profiles of temperature, salinity and other parameters. Data values may be subject to averaging or filtering or obtained by interpolation and may be reported at depth intervals as fine as 1 m. Cruise and instrument information, position, date, time and sampling interval are reported for each station. Environmental data at the time of the cast (meteorological and sea surface conditions) may also be reported. The data record comprises values of temperature, salinity or conductivity, density (computed sigma-t) and possibly dissolved oxygen or transmissivity at specified depth or pressure levels. Data may be reported at either equally or unequally spaced depth or pressure intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Ocean currents measured by Shipboard Acoustic Doppler Current Profilers (SADCP) aboard NOAA Ship Ronald H. Brown in the Caribbean Sea, Coastal Waters of Florida, Gulf of Mexico, and North Atlantic Ocean from 2007-10-08 to 2007-10-14 (NCEI Accession 0277671)

This dataset includes ADCP data collected aboard NOAA Ship Ronald H. Brown in the Caribbean Sea, Coastal Waters of Florida, Gulf of Mexico, and North Atlantic Ocean from 2007-10-08 to 2007-10-14 during originator cruise transit_to_panama_2007. These data include CURRENT SPEED - EAST/WEST COMPONENT (U) and CURRENT SPEED - NORTH/SOUTH COMPONENT (V). The instruments used to collect these data include ADCP and GPS. These ADCP data represent the raw dataset. Post processed quality assessed data are not available in this accession.

Tags: oceanography, transit_to_panama_2007
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Puget Sound Intertidal Habitat Inventory 1995: intertidal vegetation and shoreline characteristics inventory and other data in the Bellingham region of Puget Sound from 1995-06-21 to 1995-09-21 (NCEI Accession 9800018)

A survey of 110 miles of the Puget Sound shoreline was conducted from 21 June 1995 to 21 September 1995. The survey was conducted by the Washington State Department of Natural Resources and describes two components of intertidal habitat: vegetation types and shoreline characteristics. The result of survey were compiled as a CDROM titled "Puget Sound Intertidal Habitat Inventory 1995." Data include an intertidal vegetation inventory, intertidal shoreline characteristics inventory, grayscale raster image of study area, study area location, and metadata.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
CTD data including temperature, salinity and other measurements from NOAA Ship ALBATROSS IV and other platforms in the North Atlantic from 1998-01-08 to 2007-11-15 (NCEI Accession 0041814)

This dataset contains CTD data including temperature, salinity, and other measurements, from numerous vessels including ALBATROSS IV (NOAA ship; call sign WMVF; built 1962; IMO7338690), DELAWARE II (NOAA ship; call sign WZ2031; built 1968; IMO7629946) and other platforms in the North Atlantic from 1998 to 2007. These data were submitted by NOAA National Marine Fisheries Service Northeast Fisheries Center.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Proteomic Signatures of Corals from Thermodynamic Reefs (NCEI Accession 0216077)

In this work, I took a protein profiling approach known as iTRAQ approach to characterize and quantify the proteins synthesized by 12 experimental coral samples. Specifically, corals were collected from an upwelling site in the Luzon Strait ("Houbihu"; 21Â°56â18.01ââN, 120Â°44â45.54ââE) and a non-upwelling "control" site in the nearby Taiwan Strait ("Houwan"; 22Â°01'23.30"N, 120Â°41'18.29"E) and exposed to either highly variable (upwelling-simulating) or stable temperatures in the laboratory for seven days prior to sacrificing for protein analysis (the "Seriatopora hystrix variable temperature study" [SHVTS]). In this submission, I have uploaded the proofs of the manuscript describing the proteomic data (Mayfield in press Microorganisms), two RAW files (SHVTS-A & SHVTS-B for iTRAQ batches A & B, respectively), two MZML (open-access mass spectrometry data) files (SHVTS-A.mzml & SHVTS-B.mzml), two MZID files (SHVTS-A.mzid & SHVTS-B.mzid), and a tab-delimited file that describes which samples were labeled with which iTRAQ tag ("Mayfield online supplemental data file"). I have also uploaded the supplemental material that accompanies the Mayfield (in press) article since that is what readers interested in the specifics of the proteomic analysis pipeline should consult. The peak data were queried against a conceptually translated S. hystrix-Cladocopium dinoflagellate transcriptome described in Mayfield et al. (2016 Mol Ecol) and found here: http://symbiont.iis.sinica.edu.tw/s_hystrix/static/html/#stat. Please note that all proteomic data represent a mix of multiple organisms (namely the anthozoan host and the dinoflagellate endosymbionts that inhabit their gastrodermal cells). All data analysis was conducted with Proteome Discoverer (Thermo-Fisher Scientific).

Tags: belj6l, biology, biosphere, coastal processes, coral, coral reefs, corals, country/territory, earth science, hengchung, marine biology, molecular genetic analysis, nanwan bay (21n120e0008), numeric data sets, ocean basin, oceanography, oceans, pacific ocean, proteomic analysis, reef monitoring and assessment, scleractinia (stony corals), taiwan, zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from Surface underway observations using Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement and other instruments from CEFAS ENDEAVOUR in the North Sea from 2013-06-02 to 2013-06-05 (NCEI Accession 0157234)

This dataset includes Surface underway, chemical, meteorological and physical data collected from CEFAS ENDEAVOUR in the North Sea from 2013-06-02 to 2013-06-05. These data include AIR-SEA DIFFERENCE - PARTIAL PRESSURE (OR FUGACITY) OF CARBON DIOXIDE, BAROMETRIC PRESSURE, Partial pressure (or fugacity) of carbon dioxide - atmosphere, Partial pressure (or fugacity) of carbon dioxide - water, SALINITY and SEA SURFACE TEMPERATURE. The instruments used to collect these data include Carbon dioxide (CO2) gas analyzer and Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement.

These data were collected by David J. Pearce and Naomi Greenwood of Centre for Environment, Fisheries and Aquaculture Science (Cefas) as part of the Coastal_CEND_08_13 dataset. CDIAC associated the following cruise ID(s) with this dataset: 74E920130602

Tags: 74e920130602, atlantic ocean, date/time, doy, fco2_atm, fco2_sw, lat, lon, ocean carbon and acidification data system (ocads) project, oceanography, p_atm, p_equilib, pco2_atm, pco2_sw, qc comments, s_sea, sub-flag, surface underway, t_equ, t_sea, woce qc flag, xco2_atm, xco2_equ, xh2o_equ, îfco2, îpco2
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Physical and meteorological data from CTD and other instruments from NATHANIEL B. PALMER in the Southern Ocean from 1994-02-14 to 1994-03-31 (NCEI Accession 9800001)

Physical and meteorological other data were collected in the Amundsen and Bellingshausen Seas from the Nathaniel B. Palmer from 14 February 1994 to 31 February 1994. Data include in situ temperature, potential temperature, salinity, bottom depth, dissolved oxygen concentrations, wind speed, wind direction and air temperature. Data are in ASCII text.

Tags: amundsen sea, bellingshausen sea, oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Water temperature taken by XBT from the research vessel Araon in Southern Oceans (> 60 degrees South) and Southwest Pacific Ocean (limit-147 E to 140 W) from 2019-02-08 to 2019-02-12 (NCEI Accession 0287554)

Vertical temperature profiles were collected from February 8th 2019 to February 12th 2019 from the research vessel Araon during an oceanographic cruise between New Zealand and the Ross Sea in the framework of the Marine Observatory in the Ross Sea (MORSea) project of the Italian National Antarctic Research Programme (PNRA). Sippican T7 Expendable Bathythermograph (XBT) probes with a vertical resolution of 65 cm and a maximum nominal depth of 760 m were used. The mean spatial resolutions ranges between 15 nm and 20 nm, according to the specific part of the cruise. XBT launches might have been interrupted in case of severe sea and weather conditions. This implies the possible presence of gaps in the sampling. All temperature profiles are quality controlled for consistency between adjacent profiles and through spike editing. Data are provided in TXT format.

Tags: d3wn8g, marine observatory in the ross sea (morsea), oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from USS Jenkins in the East China Sea, Japan Sea, and others from 1952-02-18 to 1961-10-05 (NCEI Accession 7501112)

This dataset includes bathythermograph (MBT) data from USS Jenkins in the East China Sea, Japan Sea, North Pacific Ocean, Philippine Sea, and South China Sea from 1952-02-18 to 1961-10-05.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Unknown oceanographic data collected aboard NOAA Ship THOMAS JEFFERSON in the Gulf of Mexico from 2010-05-23 to 2010-05-28 in response to the Deepwater Horizon Oil Spill event (NCEI Accession 0084596)

Unknown oceanographic data were collected aboard NOAA Ship THOMAS JEFFERSON in the Gulf of Mexico from 2010-05-23 to 2010-05-28 in response to the Deepwater Horizon Oil Spill event on April 20, 2010, by the Subsurface Monitoring Unit (SMU), which consisted of multiple government and corporate agencies. These data include unknown data types. The instruments used to collect these data included unknown instruments along with other physical sampling devices. More specific information about each dataset is located in their individual metadata records. This dataset also contains products created for use in real time analysis and decision support. These products may include charts, graphs, maps, plots, and GIS formatted data files. Cruise level information consisting of data management documents, cruise reports and plans, videos and pictures, and other miscellaneous documentation were gathered by the data managers.

Tags: acoustic, autonomous underwater vehicle, auv, bathymetry, benthic, bp, british petroleum, coordinate system, datum, deepwater horizon, drifter, dwh, federal waters, geographic information system, geospatial data, gis, glider, global positioning system, gps, gulf coast, gulf of mexico, hydrocarbon, latitude, longitude, mc252, mississippi canyon, northern gulf of mexico, oceanography, oil plume, oil sheen, oil spill, profiling float, projection, state of louisiana, state of texas, thematic map, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (XBT) data from LYNCH in the North Atlantic Ocean from 1971-11-04 to 1971-11-25 (NCEI Accession 7200002)

This dataset includes bathythermograph (XBT) data from LYNCH in the North Atlantic Ocean from 1971-11-04 to 1971-11-25.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Sound velocity, temperature, and oxygen from BARTLETT from NE Pacific Ocean from 1969-11-22 to 1969-11-27 (NCEI Accession 7000695)

Depth was measured using a Vibrotron. Sound velocity and temperature were measured using a Ramsay MK-1 Deep Sea Probe. O2 was measured using a Beckman MINOS dissolved oxygen meter.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
SOUND VELOCITY and Other Data from USS STUMP DD-978) from 1994-01-01 to 1994-01-31 (NCEI Accession 9400027)

The sound velocity data in this accession were collected from USS STUMP DD-978 in January 1994 by US Navy. The sound velocity in water is analog profiles data that was recorded in stripcharts. Radio logs are forms that contain time, weather latitude/longitude, vessel id, ship id, etc. These are radioed every two hours to some military center. One line per strip chart. Some strip charts have time/date/ship id/latitude/longitude annotated on the strip chart. Fifty nine stripcharts and radio logs were submitted to NODC by the US Navy, San Diego, CA.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Delayed CTD and XBT data assembled and submitted by the Canada Department of Fisheries and Oceans (DFO) for the Global Temperature-Salinity Profile Programme (GTSPP)

This collection includes global ocean temperature, salinity, and nutrient profile measurements taken by shipboard observers or automated instruments and received by the Marine Environmental Data Section (MEDS) of the Ocean Sciences Branch of Fisheries and Oceans Canada from the Global Telecommunication System (GTS) of the WMO World Weather Watch. MEDS applies the documented GTSPP quality assessment and duplicates removal procedures. This collection may include data from Argo floats, Ship of Opportunity Programme (SOOP) XBT networks, moored buoys, and other platforms.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from DOLPHIN in the North Atlantic Ocean from 1970-07-14 to 1970-07-16 (NCEI Accession 7100062)

This dataset includes bathythermograph (MBT) data from DOLPHIN in the North Atlantic Ocean from 1970-07-14 to 1970-07-16.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from WOODSON in the North Pacific Ocean from 1951-07-24 to 1953-08-04 (NCEI Accession 7600280)

This dataset includes bathythermograph (MBT) data from WOODSON in the North Pacific Ocean from 1951-07-24 to 1953-08-04.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce