AndreaBozzo/ceres-open-data-index huggingface dataset:
Implementing the Florida Keys Coral Disease Response and Restoration Initiative: Number of coral outplants and survivorship by species

This dataset collection consists of yearly spreadsheets containing the corals outplanted from 2020-2023 and the survivorship over time, including but not limited to species Acropora cervicornis, Acropora palmata, Orbicella faveolata, Pseudodiploria clivosa and Montastraea cavernosa. These corals were outplanted by Mote Marine Laboratory, from 2020-01-01 to 2023-12-31 located in the Florida Keys. Mote Marine Laboratory continues to monitor each outplant one month post-outplant event, one year, three year and five years to monitor the survivorship of corals over time.

Tags: # coral outplants by species, # of coral outplants by species, 9pgr9l, alligator reef (24n080w0001), atlantic ocean, biology, biosphere, coral colony size and condition, coral condition, corals, country/territory, crw2cu, dl9pfw, earth science, eastern sambos (24n081w0009), esa listed species, fishery management council cooperative agreement, florida, florida keys, florida keys (24n081w0007), florida reef tract, in situ biological, l68xaw, looe key reef (24n081w0002), lower florida keys, lower florida keys (24n081w0021), marathon (24n081w0001), middle florida keys, monroe county, na19nmf4630259, north atlantic ocean, numeric data sets, ocean basin, oceanography, photographic analysis, reef damage assessment, reef monitoring and assessment, rock key (24n081w0011), sand key (24n081w0012), scleractinia (stony corals), sombrero reef ( sombrero key ) (24n081w0013), survivorship, united states of america, upper florida keys, western sambos (24n081w0014), zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon (DIC), total alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations during the R/V Marion Dufresne cruise OISO-04 (EXPOCODE 35MF20000117) in the Indian Ocean from 2000-01-17 to 2000-01-27 (NCEI Accession 0113575)

This dataset includes discrete profile measurements of dissolved inorganic carbon (DIC), total alkalinity, temperature, salinity, dissolved oxygen and nutrients obtained during the R/V Marion Dufresne cruise OISO-04 (EXPOCODE 35MF20000117) in the Indian Ocean from 2000-01-17 to 2000-01-27. These data were collected by Claire Lo Monaco and Nicolas Metzl of Sorbonne University (SU) as part of the CLIVAR_OISO04 dataset. The International CLIVAR Global Ocean Carbon and Repeat Hydrography Program carries out a systematic and global re-occupation of select WOCE/JGOFS hydrographic sections to quantify changes in storage and transport of heat, fresh water, carbon dioxide (CO2), and related parameters.

Tags: 35mf20000117, alkali, carina/35mf20000117, chlora, ctdoxy, ctdsal, ctdtmp, discrete measurement, indian ocean, nitrat, ocean carbon and acidification data system (ocads) project, oceanography, oiso, oiso-04, oxygen, profile, salnty, silcat, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon (DIC), total alkalinity, water temperature, salinity, nutrients and other variables collected from discrete samples and profile observations during the R/V Celtic Voyager research cruise (EXPOCODE 45CV20180128) in the North Atlantic Ocean, Irish Sea and St. Georges Channel from 2018-01-28 to 2018-02-06 (NCEI Accession 0281867)

This dataset includes discrete profile measurements of dissolved inorganic carbon, total alkalinity, water temperature, salinity, nutrients and other variables collected from discrete samples and profile observations during the R/V Celtic Voyager research cruise (EXPOCODE 45CV20180128) in the North Atlantic Ocean, Irish Sea and St. Georges Channel from 2018-01-28 to 2018-02-06. Hydrographic measurements along this section were made under the direction of the GO-SHIP.

Tags: 45cv20180128, alkali, ctdsal, ctdtmp, discrete measurement, nitrit, no2no3, north atlantic ocean, ocean carbon and acidification data system (ocads) project, oceanography, phspht, profile, r/v celtic voyager, salnty, silcat, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Northeast Pacific Regional Climatology (NCEI Accession 0163799)

The Northeast Pacific (NEP) new regional climatology is derived from the NCEI World Ocean Database archive of temperature and salinity and covers a time period from 1955 to 2012, or roughly six decades.

The NEP is an important region in the North Pacific Ocean. The NEP is home to the California Current System (CCS) and contains a large coastal upwelling zone along the west coast of North America. The CCS is one of the most productive ecosystems in the World Ocean, and its multidecadal variability is also important for long-term Earth and ocean climate change studies. Due to the economic significance and climatic importance of the CCS, intensive observational and research programs took place over many decades and yielded rich oceanographic data arrays of the CCS and adjacent NEP regions.

To provide an improved oceanographic foundation and reference for multi-disciplinary studies of the CCS and NEP, the NCEI Regional Climatology Team developed a new set of high-resolution, quality-controlled, and long-term annual, seasonal and monthly mean temperature and salinity fields at standard depth levels.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Assessment of heat stress exposure in the wider Caribbean coral reefs through the regional delineation of degree heating week data from 1985-01-01 to 2017-12-31 (NCEI Accession 0205786)

This data package presents a three-decade (1985-2017) assessment of heat stress exposure in the wider Caribbean coral reefs at the ecoregional and local scales.

The main heat stress indicator used was the Degree Heating Weeks (DHW) calculated from daily Sea Surface Temperature "CoralTemp" data from CRW-NOAA available from 1985 to the present and from the maximum monthly mean (MMM) version 3.1 at 5 km of the CRW-NOAA program. Different metrics were calculated based on daily DHW and are available in this dataset:

a) the maximum value of DHW per pixel for the entire time series
b) the frequency of the annual maximum values of DHW â¥ 4 Â°C-
weeks (a predictor of coral "bleaching risk") per pixel
c) the frequency of the annual maximum values of DHW â¥ 8 Â°C-
weeks (a predictor of bleach-induced mortality or "mortality risk") per pixel
d) the year in which the maximum of DHW occurred
e) the trend of the annual maximum values of DHW per pixel.

Based on the spatiotemporal annual maximum DHW, a new regionalization of heat stress was performed by cluster analysis with the K-means algorithm through the unsupervised classification, this new regionalization delimits the Caribbean in 8 Heat Stress Regions (HSR). We summarized spatiotemporal daily data to describe the temporal patterns at an ecoregional scale by calculating the descriptive statistics of the regional DHW on a given day.  This dataset represents a new baseline and regionalization of heat stress in the wider Caribbean coral reefs that will enhance conservation and planning efforts underway.

Tags: 2jhfmg, = 4 degree celsius weeks, = 8 degree celsius weeks, annual maximum dhw valye from 1985 to 2017, atlantic ocean, bahamas, bahamas (24n078w0000), biodiversided y funcionalidad de los arrecifes coralinos del caribe mexicano, biosphere, bleaching, caribbean sea /north atlantic ocean, clima y cambio global, climate, coral diseases, corals, country/territory, cuba, cuba (22n079w0000), degree heating week (dhw), dominican republic, dominican republic (19n070w0000), earth science, florida, florida reef tract (26n080w0007), frequency of annual maximum dh values, geographic information, greater antilles, gulf of mexico, haiti, haiti (19n072w0000), healthy reefs for healthy people (smithsonian institution and mesoamerican reef), heat-stress regions, maximum dhw value per pixel from 1987 to 2017, median of the regional dhw values on a given day, mexico, mexico (20n100w0000), mixed spatial information, north atlantic ocean, ocean basin, oceanography, puerto rico, puerto rico (18n066w0000), red oceano, reef location mask, satellite sensor, sea surface temperature, sea surface temperature (sst), trend of annual maximum dhw, united states of america, vulnerabilidad ecologica del sistema arrecifal mesoamericano, year in which the maximum dhw occurred, zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
PH, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, bottle and other instruments from Sarmiento de Gamboa in the Labrador Sea and North Atlantic Ocean from 2012-06-22 to 2012-07-20 (NCEI Accession 0156920)

This dataset includes chemical, discrete sample, physical and profile data collected from Sarmiento de Gamboa in the Labrador Sea and North Atlantic Ocean from 2012-06-22 to 2012-07-20. These data include CHLOROFLUOROCARBON-11 (CFC-11), CHLOROFLUOROCARBON-12 (CFC-12), DISSOLVED OXYGEN, HYDROSTATIC PRESSURE, NITRATE, Potential temperature (theta), SALINITY, TOTAL ALKALINITY (TA), WATER TEMPERATURE, pH, phosphate and silicate. The instruments used to collect these data include CTD and bottle.

These data were collected by AÃ­da F. RÃ­os and Fiz F. PÃ©rez of Institute of Marine Research Vigo (IIM) as part of the CLIVAR_OVIDE_2012 dataset. CDIAC associated the following cruise ID(s) with this dataset: CLIVAR_OVIDE_2012

The International CLIVAR Global Ocean Carbon and Repeat Hydrography Program carries out a systematic and global re-occupation of select WOCE/JGOFS hydrographic sections to quantify changes in storage and transport of heat, fresh water, carbon dioxide (CO2), and related parameters.

Tags: 29ah20120622, alkali, atlantic ocean, clivar_ovide_2012, ctdoxy, ctdsal, ctdtmp, discrete measurement, nitrat, ocean carbon and acidification data system (ocads) project, oceanography, ovide-12, oxygen, ph, ph_tmp, ph_tot, phspht, profile, salnty, silcat, ta, theta
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Oceanographic profile temperature, salinity and pressure measurements collected using moored buoy in the Indian Ocean from 2001-2006 (NCEI Accession 0002733)

Temperature and salinity measurements in the Equatorial Indian from 2001 to 2006 from the TRITON (TRIANGLE TRANS-OCEAN BUOY NETWORK), JAPAN AGENCY FOR MARINE-EARTH SCIENCE AND TECHNOLOGY.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (XBT) data from UNKNOWN PLATFORMS OF UNITED STATES in the Caribbean Sea, North Atlantic Ocean, and South Atlantic Ocean from 1966-11-13 to 1967-07-31 (NCEI Accession 7300471)

This dataset includes bathythermograph (XBT) data from UNKNOWN PLATFORMS OF UNITED STATES in the Caribbean Sea, North Atlantic Ocean, and South Atlantic Ocean from 1966-11-13 to 1967-07-31.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Oceanographic temperature, salinity and other profiles from CTD and ADCP taken from the Keifu Maru off the Wake Island coastal area during August 8-9, 2016 (NCEI Accession 0162264)

Oceanographic observations performed by Japan Meteorological Agency in area under national jurisdiction of the United States. Data were  submitted by the Embassy of Japan.  The data are only available within a Portable Document Format (PDF). In addition to the standard CTD parameters (depth, temperature, salinity), there are 8 other water chemistry parameters included for some casts.  There are 6 casts in total.  Current measurements from ADCP at the time of each cast are available for select levels.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Benthic Surveys in Aua, American Samoa: comprehensive assessment of coral demography (adult and juvenile corals) from belt transect surveys from 2022-09-12 to 2022-09-22 (NCEI Accession 0277490)

This dataset includes coral demographic data of Aua Reef, American Samoa, generated from observations by divers of the Ecosystem Sciences Division (ESD) of the NOAA Pacific Islands Fisheries Science Center (PIFSC). Benthic coral demographic surveys were conducted within belt transects of specified length and width for two life stages (juveniles and adults) in Aua, American Samoa in September 2022. Surveys were conducted at 18 randomly-selected sites and provide information on adult coral colony counts, morphology, size, partial mortality (old and recent dead), presence of disease and other compromised health conditions, including bleaching. Juvenile colony surveys include morphology and size. Taxonomic identification of adult colonies is to the species level (where possible) and genus level for juveniles. The survey design and site selection of stratified-random sites (StRS) follows protocols established by the National Coral Reef Monitoring Program (NCRMP).

Data from benthic surveys of Aua Reef establishes a comprehensive biological baseline for land-based sources of pollution impacts on benthic composition and coral demography. These efforts feed into the higher-level CRCP objectives by establishing an in-situ tracking system to assess the effects of management and mitigation strategies and activities in the target watersheds to reduce land-based sources of pollution impacts on coral reefs.

Tags: 31303, american samoa, baseline studies, belt transect, benthic biology, benthos analysis, biology, biosphere, coastal processes, colony - recent mortality cause, coral, coral - bleaching severity, coral - condition extent, coral - health condition, coral - morphology, coral - mortality, coral colony size and condition, coral communities, coral diseases, coral mortality, coral reef conservation program (crcp), coral reef ecology, coral reefs, corals, country/territory, earth science, gbgbul, in situ biological, linking watershed management actions to reef health in american samoa, marine biology, numeric data sets, ocean basin, oceanography, oceans, pacific ocean, pollution, reef damage assessment, reef monitoring and assessment, transect monitoring, tutuila island (14s170w0016), united states of america, zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Surface underway measurements of fugacity of carbon dioxide (fCO2), sea surface temperature, sea surface salinity and barometric pressure during R/V Tangaroa cruises in the South Pacific Ocean in 2023 (NCEI Accession 0286336)

This dataset includes surface underway, chemical, meteorological and physical data collected during R/V Tangaroa cruises in the South Pacific Ocean in 2023. These data include fugacity of carbon dioxide (fCO2), sea surface temperature, sea surface salinity and barometric pressure. The instruments used to collect these data include carbon dioxide gas analyzer and shower head chamber equilibrator for autonomous carbon dioxide measurements.

Tags: 61tg20230115, 61tg20230306, 61tg20230322, 61tg20230331, 61tg20230414, 61tg20230502, 61tg20230524, 61tg20230619, 61tg20230701, 61tg20230724, 61tg20230801, 61tg20230819, 61tg20231002, 61tg20231012, 61tg20231028, 61tg20231120, 61tg20231204, cruise id, date_utc__mmddyyy, dfco2_uatm, expocode, fco2_atm_interpolated_uatm, fco2_sw@sst_uatm, group_ship, lat_dec_degree, long_dec_degree, niwa, ocean carbon and acidification data system (ocads) project, oceanography, pres_atm@ssp_hpa, pres_equ_hpa, sal_permil, soop, south pacific ocean, southern ocean, sst_c, surface underway, tan2302, tan2303, tan2304, tan2305, tan2306, tan2307, tan2308, tan2309, tan2310, tan2311, tan2312, tan2313, tan2314, tan2315, tan2316, tan2317, tan2318, temp_equ_c, time_utc_hh:mm:ss, woce_qc_flag, woce_qc_subflag, xco2_atm_interpolated_ppm, xco2_atm_ppm, xco2_equ_ppm, yd_utc
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Partial pressure (or fugacity) of carbon dioxide, dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from underway - surface observations using Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer and other instruments from the SKOGAFOSS in the North Atlantic Ocean, North Greenland Sea and Stellwagen Bank National Marine Sanctuary from 2006-03-15 to 2007-01-04 (NCEI Accession 0112932)

This dataset includes chemical, meteorological, physical and underway - surface data collected from SKOGAFOSS in the North Atlantic Ocean, North Greenland Sea and Stellwagen Bank National Marine Sanctuary from 2006-03-15 to 2007-01-04 and retrieved during cruise SKO603, SKO604, SKO605, SKO607, SKO608, SKO609, SKO610, SKO611, SKO612 and SKO613. These data include ALKALINITY, BAROMETRIC PRESSURE, CARBON DIOXIDE - AIR, CARBON DIOXIDE - PARTIAL PRESSURE - DIFFERENCE, DISSOLVED INORGANIC CARBON, DISSOLVED OXYGEN, NITRATE, NITRITE, PHOSPHATE, Partial pressure (or fugacity) of carbon dioxide, SALINITY, SEA SURFACE TEMPERATURE, SILICATE and WATER TEMPERATURE. The instruments used to collect these data include Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement, bottle and thermosalinographs. These data were collected by Denis Pierrot, Kevin F. Sullivan, and Rik Wanninkhof of NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML) as part of the VOS_Skogafoss_Lines_2006 dataset.

Tags: agsk20060303, agsk20060403, agsk20060429, agsk20060623, agsk20060723, agsk20060818, agsk20060915, agsk20061014, agsk20061108, agsk20061208, atlantic ocean, atm_pre, del_fco2, eq_pre, eq_tmp, fco2_air_interp, fco2_wat_sst, ocean carbon and acidification data system (ocads) project, oceanography, sko603, sko604, sko605, sko607, sko608, sko609, sko610, sko611, sko612, sko613, sss, sst, surface underway, vos skogafoss lines, xco2_air, xco2_air_interp, xco2_eq
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from CURRIER in the North Pacific Ocean from 1959-01-19 to 1959-02-04 (NCEI Accession 5900006)

This dataset includes bathythermograph (MBT) data from CURRIER in the North Pacific Ocean from 1959-01-19 to 1959-02-04.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Water Quality, Nutrients and Chlorophyll Data in Biscayne Bay, Government Cut and Offshore Reefs (NCEI Accession 0248362)

The dataset is from monthly Biscayne Bay Water Quality Sampling. Sites were selected to overlap with locations occupied by FDEP and DERM in order to increase temporal resolution of their long-term monthly datasets. To achieve this, our sampling typically occurs during the third week of every month to increase sample frequency to biweekly instead of monthly. Sampling is conducted from a small research vessel. An EXO is deployed to collect in-situ water quality measurements at every station, including temperature, salinity, chlorophyll and dissolved oxygen. pH is measured using a pH probe. Secchi depth is also measured using a secchi disc. At every station, two 5L niskin bottles are deployed, one to collect surface samples and one to collect bottom samples. Sample bottles are rinsed three times with sample water before being filled. Bottles are stored on ice in the field and brought back to the laboratory for analysis. Samples are filtered immediately upon returning to the lab. Water samples for nutrient analysis are filtered using a 0.45 mM filter and frozen until analysis. Water samples collected for chlorophyll-a analysis are filtered onto glass microfiber filters, with each filter stored in individual sample tubes and stored in the -80Â°C freezer until analysis. Nutrient samples are analyzed for ammonia, soluble reactive phosphorus, nitrate+nitrite, nitrite, and silicate on a SEAL AA3 Autoanalyzer following EPA methods and NELAC standards. Chlorophyll-a is analyzed on a fluorometer following EPA methods and NELAC standards. Field duplicates are also collected and analyzed at a subset of stations to ensure quality control.

Tags: 31251, 31352, 31505, 8g7m4l, ammonia, atlantic ocean, biosphere, biscayne (25n080w0001), biscayne bay, calibrating and validating watershed models for government cut, chemistry, chlorophyll, country/territory, dade county, dissolved gases, dissolved inorganic, earth science, fl, florida, florida reef tract, geographic information, hydrosphere, integrating lbsp into the investigation of resilient coral genotypes and ongoing crcp programs, miami (25n080w0018), microbiota, nitrate, nitrite, nitrogen, north atlantic ocean, numeric data sets, nutrients, observations and models for coral water quality targets in south florida, ocean basin, ocean chemistry, ocean optics, ocean temperature, oceanography, oceans, optical depth, ph, phaeopigments, phosphate, pigments, r/v cable, salinity, salinity/density, sea surface temperature, secchi disc, silicate, total, united states of america, upper florida keys, upper florida keys (24n080w0018), water quality, water temperature
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon (DIC), total alkalinity, water temperature, salinity, dissolved oxygen, phosphate, silicate, nitrate, nitrite and other measurements collected from profile and discrete sample observations during the RRS James Cook GEOTRACES cruise JC068 (EXPOCODE 740H20111224) in the South Atlantic Ocean from 2011-12-24 to 2012-01-27 (NCEI Accession 0253907)

This dataset includes discrete profile measurements of Dissolved inorganic carbon (DIC), total alkalinity, water temperature, salinity, dissolved oxygen, phosphate, silicate, nitrate, nitrite and other measurements collected during the RRS James Cook GEOTRACES cruise JC068 (EXPOCODE 740H20111224) in the South Atlantic Ocean from 2011-12-24 to 2012-01-27.

Tags: 740h20111224, alkali, ctdoxy, ctdsal, ctdtmp, discrete measurement, geotraces, jc068, nitrat, nitrit, ocean carbon and acidification data system (ocads) project, oceanography, oxygen, phspht, salnty, silcat, south atlantic ocean, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce