AndreaBozzo/ceres-open-data-index huggingface dataset:
National Coral Reef Monitoring Program: Calcification rates of crustose coralline algae derived from calcification accretion units (CAUs) deployed in the Florida Reef Tract

The calcification rate data described here are from in-house developed calcification accretion units (CAUs) deployed by scuba divers in the Florida Reef Tract, in accordance with protocols developed by Price et al. (2012), and as a part of NOAA's ongoing National Coral Reef Monitoring Program (NCRMP). 

CAUs allow for recruitment and colonization of Crustose Coralline Algae and hard corals. By measuring the change in weight of the CAUs, the reef carbonate accretion rate can be calculated for that time period. Monitoring net accretion over successive deployments allows for the detection of changes in calcification rates over time.

This study provides information about spatial patterns of algal calcification and accretion rates and serves as a basis for detecting changes associated with changing seawater chemistry due to ocean acidification. These data can also be used in comparative analyses across natural gradients, thereby assisting efforts to determine whether key reef-building taxa can acclimatize to changing oceanographic environments. These data will have immediate, direct impacts on predictions of reef resilience in a higher carbon dioxide (CO2) world and on the design of reef management strategies.

Tags: 743, algae, algal cover, algal growth, aoml, aquatic habitat, atlantic ocean, atlantic oceanographic and meteorological lab, atlantic oceanographic and meteorological laboratory, biosphere, calcareous macroalgae, calcification, calcification accretion unit, calcification accretion unit (cau), calcification plate, calcification rate, carbonate chemistry, cau, cheeca rocks (24n080w0009), coral reef ecosystem division, coral reef ecosystem program, corals, country/territory, cred, crep, crustose coralline algae, dry tortugas, dry tortugas (24n082w0001), dry tortugas national park, earth science, ecosystem sciences division, encrusting macroalgae, esd, fleshy macroalgae, florida, florida reef tract, florida reef tract (26n080w0007), fltkuy, islamorada (24n080w0004), lb5m66, monroe county, monroe county (24n081w0020), national coral reef monitoring program (ncrmp), north atlantic ocean, numeric data sets, ocean acidification, ocean basin, ocean chemistry, oceanography, oceans, pacific islands fisheries science center, pifsc, reef habitat, reef monitoring and assessment, settling plate, triennial, united states of america, upper florida keys, upper florida keys (24n080w0018), vegetation, zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations during the R/V Haakon Mosby 58AA9803 cruise (EXPOCODE 58AA19980308) in the North Greenland Sea and Norwegian Sea from 1998-03-08 to 1998-03-24 (NCEI Accession 0113546)

This dataset includes Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations during the R/V Haakon Mosby 58AA9803 cruise (EXPOCODE 58AA19980308) in the North Greenland Sea and Norwegian Sea from 1998-03-08 to 1998-03-24. These data include ALKALINITY, DISSOLVED INORGANIC CARBON, DISSOLVED OXYGEN, HYDROSTATIC PRESSURE, NITRATE, NITRITE, PHOSPHATE, Potential temperature (theta), SALINITY, SILICATE and WATER TEMPERATURE. The instruments used to collect these data include CTD and bottle. These data were collected by Knud Simonsen and Truls Johannessen of Bjerknes Centre for Climate Research, University of Bergen; Geophysical Institute (GFI), Bergen, Norway as part of the CARINA/58AA19980308 dataset. The CARINA (CARbon dioxide IN the Atlantic Ocean) data synthesis project is an international collaborative effort of the EU IP CARBOOCEAN, and U.S. partners. It has produced a merged internally consistent dataset of open ocean subsurface measurements for biogeochemical investigations, in particular, studies involving the carbon system. The original focus area was the North Atlantic Ocean, but over time the geographic extent expanded and CARINA now includes data from the entire Atlantic, the Arctic Ocean, and the Southern Ocean.

Tags: 58aa19980308, 58aa9803, alkali, carina/58aa19980308, ctdoxy, ctdtmp, discrete measurement, nitrat, nitrit, north atlantic ocean, ocean carbon and acidification data system (ocads) project, oceanography, phspht, profile, salnty, silcat, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
FISHERY SURVEY - FISHING DURATION and Other Data from JIM LYTAL from 1980-05-29 to 1980-10-09 (NCEI Accession 8300001)

This dataset includes fish/shell-fish surveys data from JIM LYTAL in the Gulf of Mexico from 1980-05-29 to 1980-10-09.

Data has been processed by NODC to the NODC standard Fish/Shell-fish Surveys (F123) format.

The F123 format is used for data from field sampling of marine fish and shellfish. The data derive from analysis of midwater or bottom tow catches and provide information on population density and distribution. Cruise information, position, date, time, gear type, fishing distance and duration, and number of hauls are reported for each survey. Environmental data may include meteorological conditions, surface and bottom temperature and salinity, and current direction and speed. Bottom trawl or other gear dimensions and characteristics are also reported. Catch statistics (e.g., weight, volume, number of fish per unit volume) may be reported for both total haul and for individual species. Biological characteristics of selected specimens, predator/ prey information (from stomach contents analysis), and growth data may also be included. A text record is available for comment.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Ocean currents measured by Shipboard Acoustic Doppler Current Profilers (SADCP) aboard NOAA Ship Ka'imimoana in the Hawaiian Islands Humpback Whale National Marine Sanctuary, North Pacific Ocean, and South Pacific Ocean from 2010-03-29 to 2010-04-23 (NCEI Accession 0277567)

This dataset includes ADCP data collected aboard NOAA Ship Ka'imimoana in the Hawaiian Islands Humpback Whale National Marine Sanctuary, North Pacific Ocean, and South Pacific Ocean from 2010-03-29 to 2010-04-23 during originator cruise ka_10_03. These data include CURRENT SPEED - EAST/WEST COMPONENT (U) and CURRENT SPEED - NORTH/SOUTH COMPONENT (V). The instruments used to collect these data include ADCP and GPS. These ADCP data represent the raw dataset. Post processed quality assessed data are not available in this accession.

Tags: ka_10_03, oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NRDA-processed CTD data from NOAA Ship PISCES in the Gulf of Mexico, Cruise 6 Leg 1, collected from 2010-09-25 to 2010-10-03, associated with the Deepwater Horizon Oil Spill event (NCEI Accession 0130227)

Conductivity Temperature and Depth (CTD) measurements were collected aboard NOAA Ship Pisces to determine physical oceanographic parameters of the water column, and in some cases used to help guide sample collection as part of the Deepwater Horizon oil spill sampling effort. **Temperature, conductivity/salinity, depth, dissolved oxygen, and fluorometry data** were collected onboard NOAA Ship Pisces. The final product is a series of NetCDF files containing every CTD cast that has been processed and quality checked.

Tags: biota, conductivity, ctd, deepwater horizon, depth, dwh, economy, environment, fluorometry, gulf coast, gulf of mexico, latitude, longitude, mississippi canyon, oceanography, oceans, oil spill, sea_water_density, sea_water_electrical_conductivity, sea_water_pressure, sea_water_salinity, speed_of_sound_in_sea_water, state of louisiana, state of mississippi, temperature, time
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Temperature profile and water depth data collected from R/V ENDEAVOR using CTD casts from 1981-09-14 to 1981-10-01 (NCEI Accession 8600220)

Temperature profile and water depth data were collected using CTD casts from the R/V ENDEAVOR. Data were collected from 14 September 1981 to 01 October 1981 by Woods Hole Oceanographic Institution (WHOI) with support from the Warm Core Rings Program.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Temperature profile and water depth data from BT and XBT casts in the Atlantic Ocean from USCGC POLAR SEA from 1983-12-14 to 1984-05-06 (NCEI Accession 8600108)

Temperature profile and water depth data were collected using BT and XBT casts from the USCGC POLAR SEA in the Atlantic Ocean. Data were collected from 14 December 1983 to 06 May 1984 by Lamont - Doherty Geological Observatory of Columbia University and US Coast Guard with support from the Deep Freeze project.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Oceanographical observations from Danish light vessels and coastal stations in the Kattegat, The Sound, Great Belt, Little Belt from 1972-01-01 to 1972-12-31 (NCEI Accession 7800305)

This publication contains oceanographical observations from Danish light vessels and coastal stations for the year 1972. This publication was issued by the Danske Meteorologiske Institut, Copenhagen, Denmark. The data consist of temperature and salinity data found under reference number l00971, and current observations which can be found under reference number l00972, file type L153. The ships used for this study were: SKAGENS REV, LAESO NORD, ALBORG BUGT, ANHOLT NORD, KATTEGAT S, GEDSER REV, HALSSKOV REV, DRODGEN. This study was conducted on the Kattegat.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Ocean currents measured by Shipboard Acoustic Doppler Current Profilers (SADCP) aboard NOAA Ship Hi'ialakai in the National Marine Sanctuary of American Samoa, North Pacific Ocean, Rose Atoll Marine National Monument, and South Pacific Ocean from 2012-04-01 to 2012-05-24 (NCEI Accession 0277388)

This dataset includes ADCP data collected aboard NOAA Ship Hi'ialakai in the National Marine Sanctuary of American Samoa, North Pacific Ocean, Rose Atoll Marine National Monument, and South Pacific Ocean from 2012-04-01 to 2012-05-24 during originator cruise HA1201_LegII. These data include CURRENT SPEED - EAST/WEST COMPONENT (U) and CURRENT SPEED - NORTH/SOUTH COMPONENT (V). The instruments used to collect these data include ADCP and GPS. These ADCP data represent the raw dataset. Post processed quality assessed data are not available in this accession.

Tags: ha1201_legii, hi1201_legii, oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NODC Standard Product: Texas-Louisiana Shelf Circulation and Transport Processes Study, 1992-1994

This collection includes data that was collected by Texas A&M University (TAMU) as part of the Texas-Louisiana Shelf Circulation and Transport Processes Study (LATEX A), and was included in a set of NODC Standard Product CD-ROMs. This collection includes MiniSpec directional wave data, SeaData non-directional wave data, current direction/velocity, water temperature, air temperature, salinity, hydrographic, ADCP, drifting buoy, and expendable probe data, as well as project reports.

The Louisiana-Texas Shelf Physical Oceanography Program (LATEX) was sponsored by the Minerals Management Service (MMS) of the U.S. Department of the Interior. Of its three study units, the Texas-Louisiana Shelf Circulation and Transport Processes Study (LATEX A or LATEX Shelf) was conducted by the Texas A&M University System. The LATEX A field program ran from April 1992 to December 1994. The study area encompassed the Texas-Louisiana continental shelf offshore of approximately the 10-m isobath, from the Mississippi River to the Rio Grande. The five major field components were: moored current meter measurements, drifting buoys, hydrography, acoustic Doppler current profiling (ADCP), and meteorological buoys.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon, pH, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, Coulometer for DIC measurement and other instruments from the MIRAI in the North Pacific Ocean from 2004-10-13 to 2004-11-08 (NCEI Accession 0112262)

This dataset includes chemical, discrete sample, physical and profile data collected from MIRAI in the North Pacific Ocean from 2004-10-13 to 2004-11-08 and retrieved during cruise MR04-06 and PACIFICA_49NZ20041013. These data include ALKALINITY, AMMONIUM, DISSOLVED INORGANIC CARBON, DISSOLVED OXYGEN, HYDROSTATIC PRESSURE, NITRATE, NITRITE, PHOSPHATE, SALINITY, SILICATE, WATER TEMPERATURE and pH. The instruments used to collect these data include CTD, Coulometer for DIC measurement and bottle. These data were collected by Makio Honda of Japan Agency for Marine-Earth Science and Technology (JAMSTEC) as part of the PACIFICA_49NZ20041013 dataset.

PACIFICA (PACIFic ocean Interior CArbon) was an international collaborative project for the data synthesis of ocean interior carbon and its related parameters in the Pacific Ocean. The North Pacific Marine Science Organization (PICES), Section of Carbon and Climate (S-CC) supported the project.

Tags: 49nz20041013, alkali, ctdsal, ctdtmp, dic, discrete measurement, mr04-06, nitrat, nitrit, ocean carbon and acidification data system (ocads) project, oceanography, oxygen, pacific ocean, pacifica_49nz20041013, ph, phspht, profile, pt_tot, salnty, silcat, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
CTD, Oxygen, Fluorescence, Turbidity, and others collected in the DeSoto Canyon and Shelf, Gulf of Mexico, on the Weatherbird II-1411 cruise 2014-05 to 2014-06 (NCEI Accession 0159187)

This multidisciplinary cruise will occupy sites for collection of multicores, CTD/Rosette bottom imaging transects, and piston coring. The cruise will depart St. Petersburg morning of 5/29. Most of the science party will disembark in Panama City FL on 6/11. Sampling will consist of a CTD cast with water sampling as required, followed by three successful lowerings of the multicore (MUC). After completing multicore sampling, a 4-h transect with the MILET imaging platform will be completed. At selected sites, bongo tows and piston cores will be collected. Stations may be adjusted during the cruise at the discretion of the CSOB and Captain depending on water depth and accessibility. Any major changes in cruise plan to station location will be reported immediately to the FIO office.

Tags: bdngd5, deepsea to coast connectivity in the eastern gulf of mexico (deep-c), oceanography, transmission
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Potential temperature (theta), Absolute Salinity, and other variables collected from Seaglider 532 in the Southern Ocean and Drake Passage from 2016-05-10 to 2016-08-20 (NCEI Accession 0276223)

This is an .nc file of data collected by Seaglider 532 in the southern Drake Passage in autumn to winter of 2016. The temperature and salinity data were collected by unpumped CTD (Seabird), the dissolved oxygen data by an Aanderaa optode, and the optical backscatter data by an ECO puck (WetLABS). The collection dates were between May 10-August 20, 2016. The data are gridded at 5 meter resolution in depth.

Tags: 532 nm backscatter, absolute salinity, chinstrap2, dissolved oxygen, drake passage, hydrostatic pressure, latitude, longitude, oceanography, potential temperature (theta), seaglider, southern ocean, time, y0x87h
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (XBT aircraft) data from AIRCRAFT in the Philippine Sea from 1971-12-03 to 1971-12-17 (NCEI Accession 7300714)

This dataset includes bathythermograph (XBT aircraft) data from AIRCRAFT in the Philippine Sea from 1971-12-03 to 1971-12-17.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT Aircraft) (C118) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Parrotfish census and foraging parameters in the Florida Keys National Marine Sanctuary from 2013-05-01 to 2013-07-31 (NCEI Accession 0185785)

Parrotfishes were surveyed using two different methods:

1. the Reef Visual Census program (See Smith et al 2011 and Brandt et al 2009 and https://grunt.sefsc.noaa.gov/rvc_analysis20/ for more information about this program) has been conducting a visual survey of reef fish species throughout the Florida Keys since 1978.

2. The roving diver survey (see Adam et al 2015) was used in 2013 to collect data on parrotfishes only at several reefs in the Upper Florida Keys.

Both datasets provide information on number of parrotfishes per unit area in selected locations in the Florida Keys.

Parrotfish foraging parameters were also derived from behavioral observations of parrotfish feeding. See Adam et al 2015, 2018 for more details.

Tags: 42xchj, foraging parameters, oceanography, parrotfish, parrotfish grazing in the caribbean
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (XBT) data from NOAA Ship Oceanographer in the Caribbean Sea, Japan Sea, and others from 1966-12-08 to 1966-12-12 (NCEI Accession 7300760)

This dataset includes bathythermograph (XBT) data from NOAA Ship Oceanographer in the Caribbean Sea, Japan Sea, North Atlantic Ocean, North Pacific Ocean, Philippine Sea, and South China Sea from 1966-12-08 to 1966-12-12.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Fisheries Biology and Stock Assessment Division (FBSAD) Recruit and Predator Reef Fish Belt Transect and Habitat Quadrat Surveys at Hawaii Island and Midway Atoll, 2006-2007; and Oahu, 2007 only (NCEI Accession 0056602)

Shore-based belt and habitat quadrats were surveyed using transects at 1 to ~5 m depths at a total seven (7) sites: at (1-2) 2 longshore sites on the leeward coast (South Kohala district) of the Big Island (Hawaii Island) in the MHI during spring 2006 and spring-summer 2007 (spring 2007 only for predator belt transects); (3) at 1 site-group comprising multiple patch reefs located throughout north, central and south Kaneohe Bay, windward Oahu in the MHI during spring 2007; (4-5) at 2 longshore sites on the back reef of Midway Atoll in the NWHI during spring 2006 and spring-summer 2007; and (6-7) at 2 site-groups comprising multiple patch reefs within the Welles Harbor region of the lagoon of Midway Atoll during spring-summer 2007.

For predator reef fish surveys, from 12-20 randomly positioned transects were surveyed at each site or site-group in a given year.  Raw survey data consist of species-specific and size-specific numerical counts of large juvenile and adult stages of PREDATOR reef fishes encountered within transect boundaries.

For recruit reef fish surveys, from 12-25 randomly positioned transects were surveyed at each site or site-group in a given year. Raw survey data consist of species-specific and size-specific numerical counts of recruit reef fishes encountered within transect boundaries.

Quadrat surveys consisted of two types: "Reference" quadrats (whose positions were randomly selected) and "Target" quadrats (positions centered on sightings of recruit fishes). In each quadrat, the benthic cover of each of ten (10) major substratum types were estimated, as was a "Rugosity Index" based on the ratio of conforming-to-straight line distances along both major axes of the quadrat.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Multi-beam sounder data collected from the research vessel Pourquoi Pas? as part of the CASEIS cruise in the Caribbean Sea from 2016-05-28 to 2016-07-04 (NCEI Accession 0234044)

This dataset contains description of measurements taken by multi-beam sounder and bottom corers from the research vessel Pourquoi Pas? as part of the CASEIS cruise in the Caribbean Sea from 2016-05-28 to 2016-07-04. The objective of the CASEIS marine cruise was to perform a submarine paleo-seismological study to decipher the earthquake history along the Lesser Antilles subduction area. This is U.S State Department Marine Scientific Research (MSR) Research Application Tracking System (RATS) cruise U2016-010. Cruise report is in PDF.

Tags: bottom hole core sampling, bucket sampling, multi-beam sounding echo, multi-trace seismic reflection, oceanography, tf7cb2
Organization: National Oceanic and Atmospheric Administration, Department of Commerce