AndreaBozzo/ceres-open-data-index huggingface dataset:
EM302 Water Column Sonar Data Collected During NA063

Galapagos Rift

Tags: acoustic scattering, acoustic sounders, aquatic ecosystems, aquatic sciences, bathymetry, bathymetry/seafloor topography, benthic, biosphere, doc/noaa/nesdis/ncei, doc/noaa/nesdis/ngdc, earth science, ecosystems, fisheries, in situ/laboratory instruments, marine ecosystems, national centers for environmental information, national geophysical data center, nesdis, noaa, ocean acoustics, oceans, pelagic, profilers/sounders, seafloor topography, u.s. department of commerce, unknown, vertical location, water column, water column mapping system, wcms
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Active Sonar Recorded at SanctSound Site MB01_09

This record represents encounters of active sonar. Encounters of low and mid-frequency active sonar were logged manually from Long-term Spectral Averages using the Logger remora in Triton and user-defined settings. All detected signals with the same characteristics detected within 1 hour of each other were considered one encounter.These data were recorded at SanctSound Site MB01_09 between August 11, 2021 and November 21, 2021.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Broadband Sound Pressure Levels at 1 Hour Resolution Recorded at SanctSound Site CI01_06

This record represents the broadband (BB) sound pressure levels (SPLs) derived from raw passive acoustic data. BB SPLs were calculated by integration of sound pressure spectral density estimates of the mean-square pressure with a 1 Hz/1 second resolution over the frequency band of 20 to 24,000 Hz. The result is then calculated per hour as a median over no less than 1,800 1-second values for that hour and converted to decibels (dB re 1 ÂµPa). These data were recorded at SanctSound Site CI01_06 between October 22, 2020 and February 23, 2021.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Blue Whale Sound Production Recorded at SanctSound Site MB01_09

This record represents blue whale sound production detected from raw passive acoustic data. Blue whale B calls were detected using Triton's Blue Whale B Call Detector Remora. The detector uses spectrogram correlation (Mellinger and Clark, 2000) to detect calls with a kernel (an average B call) that is generated from a subset of calls. The kernel was calculated from 30 excellent quality B calls that were at least 24 hours apart. A kernel was generated per sanctuary for every six months of data. Kernel quality and optimal threshold settings were tested by running the detector through a subsample of data in which 200-400 calls were manually detected. The comparison between manual and automatic detections was used to calculate precision and recall of the detector, in percentages. Settings were considered optimal when precision and recall were both 85% or higher. These settings were then used to run the detector through the entire dataset for that deployment. Wav files were first decimated to 2 kHz sampling rate. Detector results were manually verified during time periods in which few detections were expected.These data were recorded at SanctSound Site MB01_09 between August 11, 2021 and November 21, 2021.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Metadata for Baker et al. 2023 ("Projecting I.S. forest management...https://doi.org/10.1016/j.forpol.2022.102898)

This is the data for Baker et al., contact Jeremy Martinich for additional information (martinich.jeremy@epa.gov). This dataset is not publicly accessible because: The data is owned by OAR, not ORD, and they host it. It can be accessed through the following means: Email Jeremy Martinich in EPA"s Office of Atmospheric Programs (martinich.jeremy@epa.gov). Format: N/A. 

This dataset is associated with the following publication:
Baker, J., G. van Houtven, J. Phelan, G. Latta, C. Clark, K. Austin, O. Sodiya, S. Bushey Ohrel, J. Buckley, L. Gentile, and J. Martinich. Projecting U.S. forest management, market, and carbon sequestration responses to a high-impact climate scenario manuscript.   Forest Policy and Economics. Elsevier BV, AMSTERDAM,  NETHERLANDS, 147(February 2023): 1-17, (2022).

Tags: climate-change, fasom, forest-biomass, timber
Organization: U.S. Environmental Protection Agency
ICD9 and ICD10 Comorbid Diagnosis for High Risk Veteran Patients

There are 2 datasets of high-risk patient populations; one from calendar year 2014 (N1 = 937,407),  for which we used International Classification of Disease Version 9 (ICD9) codes to identify comorbid conditions, and a second, more recent population selected from June 2017 to June 2018  (N2 = 979,607) for use with the newer International Classification of Disease Version 10 (ICD10) codes.

DOI: 10.1109/JBHI.2019.2948734

Tags: chronic-conditions, high-risk, icd10, icd9, item-response-theory, latent-class-analysis, multimorbidity, veterans, veterans-health-administration, vha
Organization: Department of Veterans Affairs
Post ingestion bioaccessibility of pesticides sorbed to soils and house dusts

post ingestion bioaccessibility data for pesticides. 

This dataset is associated with the following publication:
Parker, B., E. Valentini, S. Graham, and J. Starr. In vitro modeling of the post-ingestion bioaccessibility of per- and polyfluoroalkyl substances sorbed to soil and house dust.   TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA,  197(1): 95-103, (2024).

Tags: bioaccesibility, house-dust, ingestion, pfas, soil
Organization: U.S. Environmental Protection Agency
Dataset for Extracellular Vesicles altered by Per- and Polyfluoroalkyl Substance Mixtures: In Vitro Dose-Dependent Release, Chemical Content, and MicroRNA Signatures involved in Liver Health.

These data represent underlying data generated for the study titled 'Extracellular Vesicles altered by Per- and Polyfluoroalkyl Substance Mixtures: In Vitro Dose-Dependent Release, Chemical Content, and MicroRNA Signatures involved in Liver Health'. Data include extracellular vesicle particle count and size distribution from nanoparticle tracking analysis; microRNA expression data from mRNA sequencing in extracellular vesicles; PFAS signature data from mass spectrometry analysis of isolated HepG2 cell lysates and their secreted extracellular vesicles; in vitro cell viability data. 

This dataset is associated with the following publication:
Carberry, C., J. Bangma, L. Koval, D. Keshava, h. Hartwell, M. Sokolsky, R. Fry, and J. Rager. Extracellular vesicles altered by a per- and polyfluoroalkyl substance mixture: in vitro dose-dependent release, chemical content, and microRNA signatures involved in liver health.   TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA,  197(2): 155-169, (2024).

Tags: extracellular-vesicles, liver-toxicity, mixtures, pfas
Organization: U.S. Environmental Protection Agency
Sister Study - Neighborhood greenery, depressive symptoms, and redlining

This dataset contains health outcome (depressive symptoms defined by CES-D 10), neighborhood greenery (percent tree cover within 500m and 2000m from residences), historical HOLC grades, and sociodemographic factors (age, race/ethnicity, marital status, education, employment status, income, use of depression medication) for 3555 Sister Study participants. This dataset is not publicly accessible because: EPA cannot release personally identifiable information regarding living individuals, according to the Privacy Act and the Freedom of Information Act (FOIA). This dataset contains information about human research subjects. Because there is potential to identify individual participants and disclose personal information, either alone or in combination with other datasets, individual level data are not appropriate to post for public access. Restricted access may be granted to authorized persons by contacting the party listed. It can be accessed through the following means: Please submit data request through https://sisterstudy.niehs.nih.gov/English/coll-data.htm. Format: The Sister Study data are released in SAS format. 

This dataset is associated with the following publication:
Tsai, W., M. Nash, D. Rosenbaum, S. Prince, A. D'Aloisio, M. Mehaffey, D. Sandler, T. Buckley, and A. Neale. Association of Redlining and Natural Environment with Depressive Symptoms in Women in the Sister Study.   ENVIRONMENTAL HEALTH PERSPECTIVES. National Institute of Environmental Health Sciences (NIEHS), Research Triangle Park, NC, USA, 131(10): 107009, (2022).

Tags: depressive-symptoms, environmental-justice, neighborhood-greenery, redlining
Organization: U.S. Environmental Protection Agency
EM122 Water Column Sonar Data Collected During MGL2106

Queen Charlotte Fault Leg 2

Tags: acoustic scattering, acoustic sounders, aquatic ecosystems, aquatic sciences, bathymetry, bathymetry/seafloor topography, benthic, biosphere, doc/noaa/nesdis/ncei, doc/noaa/nesdis/ngdc, earth science, ecosystems, fisheries, in situ/laboratory instruments, marine ecosystems, national centers for environmental information, national geophysical data center, nesdis, noaa, ocean acoustics, oceans, pelagic, profilers/sounders, seafloor topography, u.s. department of commerce, unknown, vertical location, water column, water column mapping system, wcms
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Glucose Suppressed Cyanobacterial Abundance

Data shows that prophylactic addition of glucose to Harsha Lake water samples could inhibit cyanobacteria growth based on metagenomic sequencing data used to examine differences in the composition of bacterial communities between Treated and Control containers. The sequencing data shows that the addition of glucose to a container receiving weekly additions of Lake water suppressed the cyanobacterial populations during the entire summer bloom season. 

This dataset is associated with the following publication:
Linz, D., I. Struewing, N. Sienkiewicz, A.D. Steinman, C.G. Partridge, K. McIntosh, J. Lu, and S. Vesper. Periodic Addition of Glucose Suppressed Cyanobacterial Abundance in Additive Lake Water Samples during the Entire Bloom Season.   Journal of Water Resource and Protection. Scientific Research Publishing, Inc., Irvine, CA, USA, 16: 140-15, (2024).

Tags: 16s-amplicon, cyanobacteria, glucose, sequencing
Organization: U.S. Environmental Protection Agency
Consolidated State Performance Report, 2009-10

The Consolidated State Performance Report, 2009-10 (CSPR 2009-10), is part of the Consolidated State Performance Report (CSPR) program: a required annual reporting tool for each state, the Bureau of Indian Education, the District of Columbia, and Puerto Rico; program data is available since 2005-06 at <https://www2.ed.gov/admins/lead/account/consolidated/index.html>. CSPR 2009-10 (https://www2.ed.gov/admins/lead/account/consolidated/sy09-10part1/index.html; https://www2.ed.gov/admins/lead/account/consolidated/sy09-10part2/index.html) is a cross-sectional report that measures each state's progress towards implementation of the No Child Left Behind Act (NCLB) and the reporting instrument for state formula grant programs authorized by the Elementary and Secondary Education Act (ESEA) as amended by NCLB. The reporting was conducted using state education agencies' (SEAs) reports in the EDFacts online submission system. CSPR 2009-10 is a universe survey. The study's response rate was 100%.  Key statistics include information on adequate yearly progress, state performance assessments, highly qualified teachers, public school choice and supplemental education services options.

Tags: b5c3333b-259a-49c3-9576-51203d216820, consolidated-state-performance-report, elementary-and-secondary-education, esea-programs, grant-monitoring, high-school-graduation, highly-qualified-teachers, learning-environment, math-proficiency, program-monitoring, reading-language-proficiency, readinglanguage-proficiency, schools, state-activities
Organization: Department of Education
Edge-of-field agricultural conservation practice studies in the Corn Belt region

Summary dataset showing reviewed literature related to edge-of-field agricultural conservation practices in the Corn Belt region. 

This dataset is associated with the following publication:
Mitchell, M., T. Newcomer Johnson, J. Christensen, W. Crumpton, B. Dyson, T. Canfield, M. Helmers, and K. Forshay. A review of ecosystem services from edge-of-field practices in tile-drained agricultural systems in the United States Corn Belt Region.   JOURNAL OF ENVIRONMENTAL MANAGEMENT. Elsevier Science Ltd, New York, NY, USA, 348: 119220, (2023).

Tags: agriculture, biodiversity, climate-change, land-management, nitrogen-and-co-pollutants
Organization: U.S. Environmental Protection Agency
Applying Microelectrodes to Investigate Aged Ductile Iron and Copper Coupon Reactivity during Free Chlorine Application Data Set

Data set associated with manuscript Applying Microelectrodes to Investigate Aged Ductile Iron and Copper Coupon Reactivity during Free Chlorine Application. 

This dataset is associated with the following publication:
Liggett, J., B. Gonzalez, D. Lytle, J. Pressman, D.  Dionysiou, W.H. Lee, S. Harmon, and D. Wahman. Applying Microelectrodes to Investigate Aged Ductile Iron and Copper Coupon Reactivity during Free Chlorine Application.   WATER RESEARCH. Elsevier Science Ltd, New York, NY, USA, 253: 121324, (2024).

Tags: copper, corrosion, ductile-iron, microelectrode
Organization: U.S. Environmental Protection Agency
Hepatic Transcriptome Comparative In Silico Analysis Reveals Similar Pathways and Targets Altered by Legacy and Alternative Per- and Polyfluoroalkyl Substances in Mice

Dataset for Robarts et al., 'Hepatic Transcriptome Comparative In Silico Analysis Reveals Similar Pathways and Targets Altered by Legacy and Alternative Per- and Polyfluoroalkyl Substances in Mice' published in Toxics, DOI https://doi.org/10.3390/toxics11120963, PMCID 10748317. 

This dataset is associated with the following publication:
Robarts, D., J. Dai, C. Lau, U. Apte, and J. Corton. Hepatic Transcriptome Comparative In Silico Analysis Reveals Similar Pathways and Targets Altered by Legacy and Alternative Per- and Polyfluoroalkyl Substances in Mice.   Toxics. MDPI, Basel,  SWITZERLAND, 11(12): 963, (2023).

Tags: genx, ppar, srebp, stat5b, toxicogenomics
Organization: U.S. Environmental Protection Agency
Dataset title: Postfire summer stream water temperature

Data Description: Water temperature, precipitation, and watershed attributes for burned and unburned watershed sites in the Pacific Northwest. 

This dataset is associated with the following publication:
Beyene, M., and S. Leibowitz. Heterogeneity in post-fire thermal responses across Pacific Northwest streams: A multi-site study.   Journal of Hydrology X. Elsevier B.V., Amsterdam,  NETHERLANDS, 23(1): 100173, (2024).

Tags: pacific-northwest, summer-stream-temperature, water-quality, wildfire
Organization: U.S. Environmental Protection Agency
High-Throughput Transcriptomics Screen of ToxCast Chemicals in U-2 OS Cells

Supplemental datafiles for journal article 'High-Throughput Transcriptomics Screen of ToxCast Chemicals in U-2 OS Cells'.

Tags: bioinformatics, computational-toxicology, high-throughput-transcriptomics, new-approach-methods, u-2-os
Organization: U.S. Environmental Protection Agency
EM302 Water Column Sonar Data Collected During NA060

Transit Galveston to Colon

Tags: acoustic scattering, acoustic sounders, aquatic ecosystems, aquatic sciences, bathymetry, bathymetry/seafloor topography, benthic, biosphere, doc/noaa/nesdis/ncei, doc/noaa/nesdis/ngdc, earth science, ecosystems, fisheries, in situ/laboratory instruments, marine ecosystems, national centers for environmental information, national geophysical data center, nesdis, noaa, ocean acoustics, oceans, pelagic, profilers/sounders, seafloor topography, u.s. department of commerce, unknown, vertical location, water column, water column mapping system, wcms
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NOAA/WDS Paleoclimatology - Thomason - Terrapin Branch - PIEC - ITRDB AR088

This archived Paleoclimatology Study is available from the NOAA National Centers for Environmental Information (NCEI), under the World Data Service (WDS) for Paleoclimatology. The associated NCEI study type is Tree Ring. The data include parameters of tree ring with a geographic location of Arkansas, United States Of America. The time period coverage is from 92 to -72 in calendar years before present (BP). See metadata information for parameter and study location details. Please cite this study when using the data.

Tags: arkansas, biological records, climate indicators, continent, doc/noaa/nesdis/ncei, earth science, land records, latitude 35.84348, longitude -93.39982, material: null, national centers for environmental information, nesdis, noaa, north america, paleoclimate, paleoclimate indicators, piec, pinus echinata mill., shortleaf pine, terrapin branch, tree ring, tree rings, tree-ring, u.s. department of commerce, united states of america, what: age, what: earlywood width, what: latewood width, what: total ring width, width
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NOAA/WDS Paleoclimatology - Tumajer - Mont Jauffret 03 - PCGL - ITRDB CAN687

This archived Paleoclimatology Study is available from the NOAA National Centers for Environmental Information (NCEI), under the World Data Service (WDS) for Paleoclimatology. The associated NCEI study type is Tree Ring. The data include parameters of tree ring with a geographic location of Canada. The time period coverage is from 194 to -72 in calendar years before present (BP). See metadata information for parameter and study location details. Please cite this study when using the data.

Tags: biological records, canada, climate indicators, continent, doc/noaa/nesdis/ncei, earth science, land records, latitude 51.662522, longitude -68.107212, material: null, mont jauffret 03, national centers for environmental information, nesdis, noaa, north america, paleoclimate, paleoclimate indicators, pcgl, picea glauca (moench) voss, tree ring, tree rings, tree-ring, u.s. department of commerce, what: age, what: total ring width, white spruce, width
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NOAA/WDS Paleoclimatology - Filion - Kuujjuaraapik - LALA - ITRDB CAN703

This archived Paleoclimatology Study is available from the NOAA National Centers for Environmental Information (NCEI), under the World Data Service (WDS) for Paleoclimatology. The associated NCEI study type is Tree Ring. The data include parameters of tree ring with a geographic location of Canada. The time period coverage is from 240 to -38 in calendar years before present (BP). See metadata information for parameter and study location details. Please cite this study when using the data.

Tags: biological records, canada, climate indicators, continent, doc/noaa/nesdis/ncei, earth science, eastern larch, kuujjuaraapik, lala, land records, larix laricina (du roi) k. koch, latitude 55.2833, longitude -77.74, material: null, national centers for environmental information, nesdis, noaa, north america, paleoclimate, paleoclimate indicators, tamarack, tree ring, tree rings, tree-ring, u.s. department of commerce, what: age, what: total ring width, width
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NOAA/WDS Paleoclimatology - Filion - Wabush - LALA - ITRDB CAN716

This archived Paleoclimatology Study is available from the NOAA National Centers for Environmental Information (NCEI), under the World Data Service (WDS) for Paleoclimatology. The associated NCEI study type is Tree Ring. The data include parameters of tree ring with a geographic location of Canada. The time period coverage is from 122 to -43 in calendar years before present (BP). See metadata information for parameter and study location details. Please cite this study when using the data.

Tags: biological records, canada, climate indicators, continent, doc/noaa/nesdis/ncei, earth science, eastern larch, lala, land records, larix laricina (du roi) k. koch, latitude 53.7167, longitude -66.6333, material: null, national centers for environmental information, nesdis, noaa, north america, paleoclimate, paleoclimate indicators, tamarack, tree ring, tree rings, tree-ring, u.s. department of commerce, wabush, what: age, what: total ring width, width
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
NOAA/WDS Paleoclimatology - Filion - RiviÃ¨re de la Baleine - LALA - ITRDB CAN695

This archived Paleoclimatology Study is available from the NOAA National Centers for Environmental Information (NCEI), under the World Data Service (WDS) for Paleoclimatology. The associated NCEI study type is Tree Ring. The data include parameters of tree ring with a geographic location of Canada. The time period coverage is from 233 to -43 in calendar years before present (BP). See metadata information for parameter and study location details. Please cite this study when using the data.

Tags: biological records, canada, climate indicators, continent, doc/noaa/nesdis/ncei, earth science, eastern larch, lala, land records, larix laricina (du roi) k. koch, latitude 56.75, longitude -66.3667, material: null, national centers for environmental information, nesdis, noaa, north america, paleoclimate, paleoclimate indicators, riviã¨re de la baleine, tamarack, tree ring, tree rings, tree-ring, u.s. department of commerce, what: age, what: total ring width, width
Organization: National Oceanic and Atmospheric Administration, Department of Commerce