AndreaBozzo/ceres-open-data-index huggingface dataset:
Intra- and inter-laboratory evaluation of an assay of soil arsenic relative bioavailability in mice

Data were generated from US EPA Superfund site soil samples. This dataset is not publicly accessible because: EPA cannot release personally identifiable information regarding living individuals, according to the Privacy Act and the Freedom of Information Act (FOIA). This dataset contains information about human research subjects. Because there is potential to identify individual participants and disclose personal information, either alone or in combination with other datasets, individual level data are not appropriate to post for public access. Restricted access may be granted to authorized persons by contacting the party listed. It can be accessed through the following means: In the publication and supporting information. Format: These data were generated from US EPA Superfund site soil samples.  All of the soil samples were provided to NERL for methods development based on the agreement that the specific sample identifiers not be released.  The public can access the data, which are provided in the publication and presented in tables and figures within the publication. 

This dataset is associated with the following publication:
Bradham, K., C. Herde, P. Herde, A.L. Johasz, K. Herbin-Davis, B. Elek, A. Farthing, G.L. Diamond, and D.J. Thomas. Intra- and Interlaboratory Evaluation of an Assay of Soil Arsenic Relative Bioavailability in Mice.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY. American Chemical Society, Washington, DC, USA, 68(9): 2615-2622, (2020).

Tags: arsenic, bioavailability, in-vivo, soil
Organization: U.S. Environmental Protection Agency
Characterization of TiO2 and ZnO-conjugated with carbon nanotubes and graphene and growth inhibition of algae T. pseudonana exposed to these nanohybrids

The dataset describes physical and chemical characterization of four nanohybrids and their growth inhibition effect on alga Thalassiosira pseudonana. 

This dataset is associated with the following publication:
Baek, S., S.H. Joo, C. Su, and M. Toborek. Toxicity of ZnO/TiO2-conjugated carbon-based nanohybrids on the coastal marine alga Thalassiosira pseudonana.   ENVIRONMENTAL TOXICOLOGY. John Wiley & Sons, Ltd., Indianapolis, IN, USA, 35(1): 87-96, (2019).

Tags: carbon-nanotube, graphene-oxide, growth-inhibition, metal-oxides, nanohybrids, o_, thalassiosira-pseudonana, toxicity
Organization: U.S. Environmental Protection Agency
Isolating anthropogenic wetland loss by concurrently tracking inundation and land cover disturbance across the Mid-Atlantic Region, United States

Technique and resulting data for the identification of disturbed and inundated areas within the Mid-Atlantic region, data inputs, disturbance maps, and accuracy/validation assessments. 

This dataset is associated with the following publication:
Vanderhoof, M.K., J. Christensen, Y.G. Beal, B. DeVries, M.W. Lang, N. Hwang, C. Mazzarella, and J.W. Jones. Isolating Anthropogenic Wetland Loss by Concurrently Tracking Inundation and Land Cover Disturbance across the Mid-Atlantic Region, U.S..   Remote Sensing. MDPI AG, Basel,  SWITZERLAND, 12(9): 1464, (2020).

Tags: cloud-computing, disturbance, inundation, wetland-loss
Organization: U.S. Environmental Protection Agency
Brachionus leydigii (Monogononta: Ploima) reported from the western basin of Lake Erie

Brachionus leydigii (Monogononta: Ploima) reported from the western basin of Lake Erie. This dataset is not publicly accessible because: 1 specimen was reported; images available in the manuscript; water quality data and station information for EPA monitoring station where specimen was collected is available online via EPA's CDX GLENDA portal. It can be accessed through the following means: 1 specimen was reported; images available in the manuscript; water quality data and station information for EPA monitoring station where specimen was collected is available online via EPA's CDX GLENDA portal. Format: 1 specimen was reported; images available in the manuscript; water quality data and station information for EPA monitoring station where specimen was collected is available online via EPA's CDX GLENDA portal. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Tags: biological-monitoring, brachionus-leydigii, great-lakes, new-species-record, zooplankton
Organization: U.S. Environmental Protection Agency
Distributional Impacts of Energy-Heat Cross-Subsidization Data Set

Data to reproduce the results from "Distributional Impacts of Energy-Heat Cross-Subsidization" by Corbett Grainger, Andrew Schreiber and Fan Zhang, in Energy Policy. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Tags: computable-general-equilibrium
Organization: U.S. Environmental Protection Agency
Overview and characteristics of air quality in the Seoul Metropolitan Area during the KORUS-AQ campaign

Data collected for this research provides information on mixing layer heights and in-situ formaldehyde concentrations at Olympic Park during the KORUS-AQ field campaign. 

This dataset is associated with the following publication:
Kim, H., J. Gil, J. Jung, A. Whitehill, J. Szykman, G. Lee, D. Kim, S. Cho, J. Ahn, J. Hong, and M. Park. Factors controlling surface ozone in the Seoul Metropolitan Area During the Korus AQ campaign.   Elementa: Science of the Anthropocene. University of California Press (UC Press), Oakland, CA, USA,  NA, (2020).

Tags: air-quality, atmospheric-mixed-layer, formaldehyde, korea, korus-aq, ozone, seoul
Organization: U.S. Environmental Protection Agency
Sister Study - Natural Features and General Health

Natural features within 250m and 1250m from residences and their relationships with general health. This dataset is not publicly accessible because: EPA cannot release personally identifiable information regarding living individuals, according to the Privacy Act and the Freedom of Information Act (FOIA). This dataset contains information about human research subjects. Because there is potential to identify individual participants and disclose personal information, either alone or in combination with other datasets, individual level data are not appropriate to post for public access. Restricted access may be granted to authorized persons by contacting the party listed. It can be accessed through the following means: Contact the Sister Study, National Institute of Environmental Health Sciences. Format: Natural features within 250m and 1250m from residences and their relationships with general health. 

This dataset is associated with the following publication:
Tsai, W., R.A. Silva, M. Nash, F. Cochran, S. Prince, D. Rosenbaum, A.A. D'Aloisio, L. Jackson, M. Mehaffey, A. Neale, D.P. Sandler, and T. Buckley. How do natural features in the residential environment influence women's self-reported general health? Results from cross-sectional analyses of a U.S. national cohort.   ENVIRONMENTAL RESEARCH. Elsevier B.V., Amsterdam,  NETHERLANDS, 183: 109176, (2020).

Tags: climate, eco-health, general-health, gradient-boosted-regression-trees, natural-features, us-national-cohort
Organization: U.S. Environmental Protection Agency
The Influence of Incubation Time on Adenovirus Quantitation in A549 Cells by Most Probable Number

This dataset contains the data described in Cashdollar et al. 2016. The Influence of Incubation Time on Adenovirus Quantitation in A549 Cells by Most Probable Number. J Virol. Methods 237: 200-203. 

This dataset is associated with the following publication:
Cashdollar, J., E. Huff, H. Ryu, and A. Grimm. The influence of incubation time on adenovirus quantitation in A549 cells by most probable number.   JOURNAL OF VIROLOGICAL METHODS. Elsevier Science Ltd, New York, NY, USA, 237: 200-203, (2016).

Tags: adenovirus, adenovirus-disinfection, adenovirus-quantitation, cell-culture, uv-treatment, virus-recovery
Organization: U.S. Environmental Protection Agency
Model data sets

These are large gridded computational fluid dynamics model point data. This dataset is not publicly accessible because: File type and size. It can be accessed through the following means: A request is being placed with the EDG Administrative Group to host the large files on an accessible server. Format: This data set is over 7 GB and an incompatible data format (.dat). 

This dataset is associated with the following publication:
Hagler , G., and W. Tang. Simulation of rail yard emissions transport to the near-source environment.   Atmospheric Pollution Research. Turkish National Committee for Air Pollution Research and Control, Izmir,  TURKEY, 7(3): 469-476, (2016).

Tags: air-pollution, dispersion, near-source, rail-yard
Organization: U.S. Environmental Protection Agency
phytoplankton/zooplankton NLA 2012 for L&O paper

Observations of phytoplankton, chlorophyll, and zooplankton from 2017 NLA. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Tags: chlorophyll, phytoplankton, zooplankton
Organization: U.S. Environmental Protection Agency
BDSNP Module for Improved Soil NO Emission Estimates for CMAQ Model, Conterminous USA

This model product contains the source code for the updated Berkeley-Dalhousie Soil NOx Parameterization (BDSNP) module implementation with the Community Multiscale Air Quality (CMAQ) model. The update incorporates dynamic representation of the soil nitrogen pool on a day to day basis from the Environmental Policy Integrated Climate (EPIC) biogeochemical model. Sample input data and three sets of model outputs covering the conterminous United States are included with this data set. The three sets of outputs represent three different applications of the CMAQ as described in Rasool et al. (2016). The BDSNP module helps to improve the timing and spatial distribution of estimates of soil nitric oxide (NO) emissions through parameterization of soils, meteorology, land use, and mineral nitrogen availability from both fertilization and deposition. The simulations use a 12 km spatial grid resolution for CMAQ modeling for July 2011. 

This dataset is associated with the following publication:
Rasool, Q., R. Zhang, B. Lash, D. Cohan, E. Cooter, J. Bash, and L. Lamsal. Enhanced representation of soil NO emissions in the Community Multiscale Air Quality (CMAQ) model version 5.0.2.   Geoscientific Model Development. Copernicus Publications, Katlenburg-Lindau,  GERMANY, 9: 3177-3197, (2016).

Tags: agricultural, bdsnp, biome, cmaq, epic, fertilizer, nitric-oxide-no, soil
Organization: U.S. Environmental Protection Agency
Glaberman et al 2019 Chemosphere

This dataset contains toxicity endpoint and mode-of-action information used in an analysis of comparative toxicity and surrogate data approaches to ecological risk assessment of amphibians. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Tags: amphibians, ecological-risk-assessment, ecotoxicology, fish, frogs, pesticides
Organization: U.S. Environmental Protection Agency
NLCD & EnviroAtlas %IC for selected metropolitan areas

Several files of percentage impervious cover (%IC) from 30-m and 1-m data.  The individual files contain %IC for different spatial support units. 

This dataset is associated with the following publication:
Wickham, J., S.V. Stehman, and M. Mehaffey. Accuracy assessment of NLCD 2011 percent impervious cover for selected USA metropolitan areas.   International Journal of Applied Earth Observation and Geoinformation. Elsevier BV, AMSTERDAM,  NETHERLANDS, 84: 101955, (2020).

Tags: bias, impervious-cover, regression-modeling, water-quality, watersheds
Organization: U.S. Environmental Protection Agency
Granular Activated Carbon Adsorption of Carcinogenic Volatile Organic Compounds at Low Influent Concentrations

Breakthrough data in granular activated carbon columns for carcinogenic volatile organic compounds. 

This dataset is associated with the following publication:
Kempisty, D., R.S. Summers, G. Abulikemu , N. Deshpande, J. Rebholz, K. Roberts , and J. Pressman. Granular Activated Carbon Adsorption of Carcinogenic Volatile Organic Compounds at Low Influent Concentrations.   Journal AWWA. American Water Works Association, Denver, CO, USA, 1(2): e1128, (2019).

Tags: carcinogenic-volatile-organic-compounds, natural-organic-matter
Organization: U.S. Environmental Protection Agency
This Excel sheet contains 1344 Issues from 2018 posted to the OpenSwmm List Serv.

The first row of the Excel spreadsheet describes the data - ID number, Metamorphic Relation Topic, Title of Comment, Type of Comment,  Content of the Comment.  Our original dataset contained names but these were removed from the dataset.

Tags: association-rules, metamorphic-relations, metamorphic-testing, swmm, user-validation
Organization: U.S. Environmental Protection Agency
Focus group responses for VSL alternative terms

This dataset is individual responses from focus group participants rating the desirability of alternative terms to describe the economic tradeoff between income and small changes in mortality risk. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Tags: focus-group, mortality-risk-valuation, terminology, value-of-statistical-life
Organization: U.S. Environmental Protection Agency
Data set for Kosnik et al

The zip file contains all data and scripts used for the material presented in the manuscript by Kosnik et al. 

This dataset is associated with the following publication:
Kosnik, M., J. Strickland, S. Marvel, D. Wallis, K. Wallace, A. Richard, D. Reif, and T. Shafer. Concentration-Response Evaluation of ToxCast Compounds for Multivariate Activity Patterns of Neural Network Function.   Archives of Toxicology. Springer, New York, NY, USA, 94: 469-484, (2020).

Tags: electrophysiology, in-vitro, microelectrode-array, neurotoxicity-screening, toxcast
Organization: U.S. Environmental Protection Agency
PCB Food Bioaccessibility

Bioaccessibility dat for PCBs and food types. 

This dataset is associated with the following publication:
Starr, J., W. Li, S. Graham, H. Shen, and F. Waldron. Is food type important for in vitro post ingestion bioaccessibility models of polychlorinated biphenyls sorbed to soil.   SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM,  NETHERLANDS, 704: 135421, (2020).

Tags: bioaccessibility, food, ingestion, polychlorinated-biphenyls, soil
Organization: U.S. Environmental Protection Agency
Resolving ambient organic aerosol formation and aging pathways with simultaneous molecular composition and volatility observations

Dataset contains CMAQv5.3-predicted hourly average concentrations of organic aerosol and other species (HO2, NO, NO3, O3, OH) for Hyytiala, Finland (location of BAECC field campaign) and Centreville, AL, USA (main location of SOAS field campaign) for 2016. How species were created from raw CMAQ output is defined in Table S2 of the paper this data supports. CMAQ v5.3 code is also linked here. The specific configuration of CMAQ is described in the manuscript associated with this data. 

This dataset is associated with the following publication:
Lee, B., E. D'Ambro, F. Lopez-Hilfiker, S. Schobesberger, C. Mohr, M. Zawakowicz, J. Liu, J. Shilling, W. Hu, B. Palm, J. Jimenez, L. Hao, A. Virtanen, H. Zhang, A. Goldstein, H. Pye, and J. Thornton. Resolving Ambient Organic Aerosol Formation and Aging Pathways with Simultaneous Molecular Composition and Volatility Observations.   ACS Earth and Space Chemistry. American Chemical Society, Washington, DC, USA, 4(3): 391-402, (2020).

Tags: aging, biogenic-voc, boreal-forest, highly-oxidized-molecules, hom, isoprene, monoterpene, pm2-5, pm2-5-air-quality-modeling, semivolatile-organic-compounds-svocs, soa, source-apportionment, volatility
Organization: U.S. Environmental Protection Agency
Ohio Vital Statistics Birth and Autism Data

Input datasets on Ohio Birth and Autism will not be made accessible to the public due to the fact that they include individual-level data with PII. Output data are all available in tabulated form within the published manuscript. This dataset is not publicly accessible because: EPA cannot release personally identifiable information regarding living individuals, according to the Privacy Act and the Freedom of Information Act (FOIA). This dataset contains information about human research subjects. Because there is potential to identify individual participants and disclose personal information, either alone or in combination with other datasets, individual level data are not appropriate to post for public access. Restricted access may be granted to authorized persons by contacting the party listed. It can be accessed through the following means: Input data can be obtained from Applications from owners of the data (Children's Hospital and Ohio Department of Health).  The tabulated output data is found in the manuscript. Format: Input datasets on Ohio Birth and Autism will not be made accessible to the public due to the fact that they include individual-level data with PII. Output data are all available in tabulated form within the published manuscript (e.g., results of regression models, measures of central tendency, population characteristics, etc.). 

This dataset is associated with the following publication:
Kaufman, J., M. Wright, G. Rice, N. Connolly, K. Bowers, and J. Anixt. AMBIENT OZONE AND FINE PARTICULATE MATTER EXPOSURES AND AUTISM SPECTRUM DISORDER IN METROPOLITAN CINCINNATI, OHIO.   ENVIRONMENTAL RESEARCH. Elsevier B.V., Amsterdam,  NETHERLANDS, 171: 218-227, (2019).

Tags: air-pollution, autism-spectrum-disorder, birth-data
Organization: U.S. Environmental Protection Agency
Soil taxonomic assessment data, urban and referrence soil profiles

By comparing urban to pre-urban soils we quantified major shifts in horizon occurrence and ordering. These shifts have meaning for ecosystem function as horizons represent suites of biological, physical, and chemical properties. 

This dataset is associated with the following publication:
Herrmann, D., L. Schifman, and W. Shuster. Widespread loss of intermediate soil horizons in urban landscapes.   PNAS  (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES). National Academy of Sciences, WASHINGTON, DC, USA, 115(26): 6751-6755, (2018).

Tags: ecosystem-services, soil-horizons, urban-soil-taxonomic-assessments, urban-soils, urbanization, vertical-structure
Organization: U.S. Environmental Protection Agency
Estimation of the Emission Characteristics of SVOCs from Household Articles Using Group-Contribution Methods

The attached dataset, including data dictionary, provides all the EPA-generated data for the publication Estimation of the Emission Characteristics of SVOCs from Household Articles Using Group Contribution Methods” by Cody K. Addington, Katherine A. Phillips, and Kristin K. Isaacs. 

This dataset is associated with the following publication:
Addington, C., K. Phillips, and K. Isaacs. Estimation of the Emission Characteristics of SVOCs from Household Articles Using Group Contribution Methods.   ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 54(1): 110-119, (2020).

Tags: building-materials, chemical-emission, expocast, exposure-assessment, human-exposure-modeling, phthalates, plasticizers, svocs
Organization: U.S. Environmental Protection Agency
Naphthalene PBPK Model with Inhalation and Skin Routes of Exposure

This data set includes source code that implements a PBPK model for naphthalene that allows for inhalation and skin routes of exposure. It also includes data previously published by Kim et al. (2006) that were used to calibrate and evaluate the model. The model is described in a paper that is in review at the journal Toxicological Sciences.

Tags: inhalation, mathematical-model, naphthalene, partial-differential-equation-model, pbpk-model, skin
Organization: U.S. Environmental Protection Agency
Simulating Lightning NOX Production in CMAQ: Evolution of Scientific Updates

The dataset contains lightning produced column NO from different schemes with different parameters and the resulting surface ozone mixing ratios by incorporating different lightning production schemes. 

This dataset is associated with the following publication:
Kang, D., K. Pickering, D. Allen, K. Foley, C. Wong, R. Mathur, and S. Roselle. Simulating lightning NO production in CMAQv5.2: evolution of scientific updates.   Geoscientific Model Development. Copernicus Publications, Katlenburg-Lindau,  GERMANY, 12(7): 3071–3083, (2019).

Tags: air-quality, lightning-nox-emissions, nox-emissions, ozone
Organization: U.S. Environmental Protection Agency
Ozone data for "Ozone-related asthma exacerbation emergency department visits in the US in a warming climate," by Nassikas et al.

This dataset contains near-surface ozone concentrations simulated using the Community Multiscale Air Quality (CMAQ) model for the period 2036-2045 under two future climate scenarios and using a 2040 projection for air pollutant emissions.
The data were used in a manuscript by Nassikas et al., published in Environmental Research in 2020. 

This dataset is associated with the following publication:
Nassikas, N., K. Spangler, N. Fann, C. Nolte, P. Dolwick, T. Spero, P. Sheffield, and G. Willenius. Ozone-related asthma emergency department visits in the US in a warming climate.   ENVIRONMENTAL RESEARCH. Elsevier B.V., Amsterdam,  NETHERLANDS, 183: 109206, (2020).

Tags: air-quality, climate-change, cmaq, dynamical-downscaling, regional-climate-modeling
Organization: U.S. Environmental Protection Agency
Data from "Air pollution control strategies directly limiting national health damages in the US", by Ou et al.

This file describes the dataset used in Ou et al., "Air pollution control strategies directly limiting national health damages in the US."

This work used the Global Change Assessment Model (GCAM) with state-level representation of the U.S. energy system (GCAM-USA). GCAM and GCAM-USA are developed and released by the University of Maryland/Pacific Northwest National Laboratory Joint Global Change Research Center (JGCRI). For further details, see the GCAM documentation: jgcri.github.io/gcam-doc. The model source code is available at github.com/JGCRI/gcam-core.

A modified version of GCAMv4.3 was used for this analysis. Source code and input data specific for this paper are available upon request. 

This dataset contains Excel spreadsheets and an R script that link to comma-separated values (CSV) files that were extracted from the model output. The spreadsheets and scripts show the data and reproduce each of the figures in the paper. 

This dataset is associated with the following publication:
Ou, Y., J. West, S. Smith, C. Nolte, and D. Loughlin. Air pollution control strategies directly limiting national health damages in the US..   Nature Communications. Nature Publishing Group, London,  UK, 11: 957, (2020).

Tags: air-quality, emissions, gcam-usa, integrated-assessment-modeling
Organization: U.S. Environmental Protection Agency