AndreaBozzo/ceres-open-data-index huggingface dataset:
Thiaminase activity measurements in whole zebrafish

Data describe results of a set of laboratory experiments using a previously described quantitative thiaminase I activity assay to test the thiaminase activity of whole zebrafish homogenates. Parameters described include the thiaminase activity data, dilution factors, incubation time, and tissue weight assayed. Experiments were conducted at the USGS Columbia Environmental Research Center, Columbia, MO in 2006.

Tags: biota, fish, polyacrylamide-gel-electrophoresis, usgs-63c6c367d34e92aad3d11f2f, zebrafish
Organization: Department of the Interior
California Mule Deer Siskiyou Stopovers

The Siskiyou mule deer herd migrates from winter ranges primarily north and east of Mount Shasta (i.e., Day Bench, Lake Shastina, Montague, Mount Dome, Mount Hebron, Sheep-Mahogany Mountain, Tionesta, and Wild Horse Mountain) to sprawling summer ranges scattered between the Mount Shasta Wilderness in the west and the Burnt Lava Flow Geological Area in the east. A small percentage of the herd are residents, residing largely within winter ranges across the central and northeast areas of the herd’s annual distribution. The total population size of the Siskiyou herd is unknown, but adult deer densities averaged 6.01 deer per km2 on summer ranges in 2017 and 5.16 deer per km2 on winter ranges in 2019 (Wittmer and others, 2021). Some deer cross major highways during their seasonal migrations (U.S. Highways 97 and 89), and road mortalities of telemetered deer have been recorded. The summer range poses few concerns to the health of the herd, although limited water availability and recent forest fires may affect deer to some extent. Possible risks to deer population health on the winter range are relatively unknown. While recreational (hunting) opportunities have declined, the herd’s status is considered stable.
These mapping layers show the location of the migration stopovers for mule deer (Odocoileus hemionus) in the Siskiyou population in California. They were developed from 167 migration sequences collected from a sample size of 67 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, migration-organisms, migration-route, migratory-species, mount-shasta, united-states, usgs-63650c09d34ebe442507ce9b
Organization: Department of the Interior
California Mule Deer Siskiyou Routes

The Siskiyou mule deer herd migrates from winter ranges primarily north and east of Mount Shasta (i.e., Day Bench, Lake Shastina, Montague, Mount Dome, Mount Hebron, Sheep-Mahogany Mountain, Tionesta, and Wild Horse Mountain) to sprawling summer ranges scattered between the Mount Shasta Wilderness in the west and the Burnt Lava Flow Geological Area in the east. A small percentage of the herd are residents, residing largely within winter ranges across the central and northeast areas of the herd’s annual distribution. The total population size of the Siskiyou herd is unknown, but adult deer densities averaged 6.01 deer per km2 on summer ranges in 2017 and 5.16 deer per km2 on winter ranges in 2019 (Wittmer and others, 2021). Some deer cross major highways during their seasonal migrations (U.S. Highways 97 and 89), and road mortalities of telemetered deer have been recorded. The summer range poses few concerns to the health of the herd, although limited water availability and recent forest fires may affect deer to some extent. Possible risks to deer population health on the winter range are relatively unknown. While recreational (hunting) opportunities have declined, the herd’s status is considered stable.
These mapping layers show the location of the migration routes for mule deer (Odocoileus hemionus) in the Siskiyou population in California. They were developed from 167 migration sequences collected from a sample size of 67 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, migration-organisms, migration-route, migratory-species, mount-shasta, united-states, usgs-63650c06d34ebe442507ce99
Organization: Department of the Interior
California Mule Deer Siskiyou Corridors

The Siskiyou mule deer herd migrates from winter ranges primarily north and east of Mount Shasta (i.e., Day Bench, Lake Shastina, Montague, Mount Dome, Mount Hebron, Sheep-Mahogany Mountain, Tionesta, and Wild Horse Mountain) to sprawling summer ranges scattered between the Mount Shasta Wilderness in the west and the Burnt Lava Flow Geological Area in the east. A small percentage of the herd are residents, residing largely within winter ranges across the central and northeast areas of the herd’s annual distribution. The total population size of the Siskiyou herd is unknown, but adult deer densities averaged 6.01 deer per km2 on summer ranges in 2017 and 5.16 deer per km2 on winter ranges in 2019 (Wittmer and others, 2021). Some deer cross major highways during their seasonal migrations (U.S. Highways 97 and 89), and road mortalities of telemetered deer have been recorded. The summer range poses few concerns to the health of the herd, although limited water availability and recent forest fires may affect deer to some extent. Possible risks to deer population health on the winter range are relatively unknown. While recreational (hunting) opportunities have declined, the herd’s status is considered stable.
These mapping layers show the location of the migration corridors for mule deer (Odocoileus hemionus) in the Siskiyou population in California. They were developed from 167 migration sequences collected from a sample size of 67 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, migration-organisms, migration-route, migratory-species, mount-shasta, united-states, usgs-63650c01d34ebe442507ce97
Organization: Department of the Interior
California Mule Deer Salt Springs Winter Range

The Salt Springs herd winters in the western foothills of the Sierra Nevada predominantly on private property from Tylers Corner south to Sheep Ranch. The summer range is in high-elevation terrain near Lower Bear River Reservoir and Salt Springs Reservoir. The winter range consists of mainly oak woodland habitat and the summer range includes primarily mixed conifer opening up to high alpine granite near the crest of the Sierra Nevada. The population size is unknown due to limited data. This GPS collaring project was designed as part of a region-wide effort to obtain abundance estimates for deer using fecal DNA and home range analyses, with pinpointing migration routes and identifying winter ranges a secondary priority. Therefore, other winter range and migration corridor routes probably exist apart from what the limited sample size revealed. Future work will help pinpoint the boundaries of this herd, particularly important for comparison to the Railroad Flat herd, which overlaps on the winter range with the Salt Springs herd (though uses a unique summer range).
These mapping layers show the location of the winter ranges for mule deer (Odocoileus hemionus) in the Salt Springs population in California. They were developed from 8 sequences collected from a sample size of 6 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, migration-organisms, migration-route, migratory-species, sheep-ranch, united-states, usgs-63650bfbd34ebe442507ce95
Organization: Department of the Interior
California Mule Deer Salt Springs Routes

The Salt Springs herd winters in the western foothills of the Sierra Nevada predominantly on private property from Tylers Corner south to Sheep Ranch. The summer range is in high-elevation terrain near Lower Bear River Reservoir and Salt Springs Reservoir. The winter range consists of mainly oak woodland habitat and the summer range includes primarily mixed conifer opening up to high alpine granite near the crest of the Sierra Nevada. The population size is unknown due to limited data. This GPS collaring project was designed as part of a region-wide effort to obtain abundance estimates for deer using fecal DNA and home range analyses, with pinpointing migration routes and identifying winter ranges a secondary priority. Therefore, other winter range and migration corridor routes probably exist apart from what the limited sample size revealed. Future work will help pinpoint the boundaries of this herd, particularly important for comparison to the Railroad Flat herd, which overlaps on the winter range with the Salt Springs herd (though uses a unique summer range).
These mapping layers show the location of the migration routes for mule deer (Odocoileus hemionus) in the Salt Springs population in California. They were developed from 13 migration sequences collected from a sample size of 6 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, migration-organisms, migration-route, migratory-species, sheep-ranch, united-states, usgs-63650bf5d34ebe442507ce91
Organization: Department of the Interior
California Mule Deer Manache Winter Range

The Manache mule deer herd contains both California mule deer (Odocoileus hemionus californicus) and Inyo mule deer (Odocoileus hemionus inyoensis). The herd predominantly covers the east slopes and crest of the Sierra Nevada. Elevation stretches from 3,200 ft on the Owens Valley winter range, to above 11,000 ft on the summer ranges in Sequoia National Park. The Manache herd migrates from winter ranges just west of U.S. Route 395 on the steep slopes and valleys of the Sierra Nevada near Dunmovin and Haiwee east to some of the highest elevations in the continental United States in Inyo and Sequoia National Forests. Deer numbers were very low by 1900, attributed largely to extreme overgrazing by domestic sheep and cattle, and the subsequent denuding of much of the herd’s summer range. Under the U.S. Forest Service’s jurisdiction, livestock allotments decreased and timber harvest improved range conditions with a resulting increase in deer numbers. Herd size peaked at approximately 7,000 animals in 1950. Following that peak, plant succession, more efficient fire suppression, and livestock competition contributed to a decline in herd size. The 1970s witnessed a reversal of this decline, with a dramatic increase to nearly 7,000 deer, but the current population size is unknown.
These mapping layers show the location of the winter ranges for mule deer (Odocoileus hemionus) in the Manache population in California. They were developed from 96 sequences collected from a sample size of 42 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, dunmovin, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bedd34ebe442507ce8d
Organization: Department of the Interior
California Mule Deer Manache Stopovers

The Manache mule deer herd contains both California mule deer (Odocoileus hemionus californicus) and Inyo mule deer (Odocoileus hemionus inyoensis). The herd predominantly covers the east slopes and crest of the Sierra Nevada. Elevation stretches from 3,200 ft on the Owens Valley winter range, to above 11,000 ft on the summer ranges in Sequoia National Park. The Manache herd migrates from winter ranges just west of U.S. Route 395 on the steep slopes and valleys of the Sierra Nevada near Dunmovin and Haiwee east to some of the highest elevations in the continental United States in Inyo and Sequoia National Forests. Deer numbers were very low by 1900, attributed largely to extreme overgrazing by domestic sheep and cattle, and the subsequent denuding of much of the herd’s summer range. Under the U.S. Forest Service’s jurisdiction, livestock allotments decreased and timber harvest improved range conditions with a resulting increase in deer numbers. Herd size peaked at approximately 7,000 animals in 1950. Following that peak, plant succession, more efficient fire suppression, and livestock competition contributed to a decline in herd size. The 1970s witnessed a reversal of this decline, with a dramatic increase to nearly 7,000 deer, but the current population size is unknown.
These mapping layers show the location of the migration stopovers for mule deer (Odocoileus hemionus) in the Manache population in California. They were developed from 97 migration sequences collected from a sample size of 39 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, dunmovin, migration-organisms, migration-route, migratory-species, united-states, usgs-63650be8d34ebe442507ce8b
Organization: Department of the Interior
California Mule Deer Manache Routes

The Manache mule deer herd contains both California mule deer (Odocoileus hemionus californicus) and Inyo mule deer (Odocoileus hemionus inyoensis). The herd predominantly covers the east slopes and crest of the Sierra Nevada. Elevation stretches from 3,200 ft on the Owens Valley winter range, to above 11,000 ft on the summer ranges in Sequoia National Park. The Manache herd migrates from winter ranges just west of U.S. Route 395 on the steep slopes and valleys of the Sierra Nevada near Dunmovin and Haiwee east to some of the highest elevations in the continental United States in Inyo and Sequoia National Forests. Deer numbers were very low by 1900, attributed largely to extreme overgrazing by domestic sheep and cattle, and the subsequent denuding of much of the herd’s summer range. Under the U.S. Forest Service’s jurisdiction, livestock allotments decreased and timber harvest improved range conditions with a resulting increase in deer numbers. Herd size peaked at approximately 7,000 animals in 1950. Following that peak, plant succession, more efficient fire suppression, and livestock competition contributed to a decline in herd size. The 1970s witnessed a reversal of this decline, with a dramatic increase to nearly 7,000 deer, but the current population size is unknown.
These mapping layers show the location of the migration routes for mule deer (Odocoileus hemionus) in the Manache population in California. They were developed from 97 migration sequences collected from a sample size of 39 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, dunmovin, migration-organisms, migration-route, migratory-species, united-states, usgs-63650be4d34ebe442507ce89
Organization: Department of the Interior
California Mule Deer Kern River Winter Range

The Kern River deer herd includes primarily California mule deer (Odocoileus hemionus californicus), but some Inyo mule deer (Odocoileus hemionus inyoensis) associate with California mule deer on the summer range. The population size peaked at 11,000 individuals in 1949, but in recent decades numbers have decreased to an estimated 3,500 deer in 1995 and 2,000 deer in 2001. The population size estimate is now, conservatively, approximately 4,000 individuals owing primarily to habitat expansion by the 2001 McNally Fire (California Department of Fish and Wildlife unpublished data). The Kern River herd winters in Sequoia National Forest north of Johnsondale and east of Slate Mountain. In the spring, they migrate northward to an area by Redrocks Meadows and along the Kern Canyon ridgeline to their summer range in Sequoia National Park. The herd’s annual range spans the watersheds of the Kern and Little Kern rivers in eastern Tulare County. Elevations range from 2,500 ft on the southern slopes of the winter range to over 11,000 ft on the northern summer range. Telemetry data over the past two decades show considerable mixing between this herd and the Manache herd on their summer ranges. Further research may support the hypothesis that these herds are actually sub-herds of a larger population.
These mapping layers show the location of the winter ranges for mule deer (Odocoileus hemionus) in the Kern River population in California. They were developed from 60 sequences collected from a sample size of 27 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, johnsondale, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bdcd34ebe442507ce85
Organization: Department of the Interior
California Mule Deer Kern River Stopovers

The Kern River deer herd includes primarily California mule deer (Odocoileus hemionus californicus), but some Inyo mule deer (Odocoileus hemionus inyoensis) associate with California mule deer on the summer range. The population size peaked at 11,000 individuals in 1949, but in recent decades numbers have decreased to an estimated 3,500 deer in 1995 and 2,000 deer in 2001. The population size estimate is now, conservatively, approximately 4,000 individuals owing primarily to habitat expansion by the 2001 McNally Fire (California Department of Fish and Wildlife unpublished data). The Kern River herd winters in Sequoia National Forest north of Johnsondale and east of Slate Mountain. In the spring, they migrate northward to an area by Redrocks Meadows and along the Kern Canyon ridgeline to their summer range in Sequoia National Park. The herd’s annual range spans the watersheds of the Kern and Little Kern rivers in eastern Tulare County. Elevations range from 2,500 ft on the southern slopes of the winter range to over 11,000 ft on the northern summer range. Telemetry data over the past two decades show considerable mixing between this herd and the Manache herd on their summer ranges. Further research may support the hypothesis that these herds are actually sub-herds of a larger population.
These mapping layers show the location of the migration stopovers for mule deer (Odocoileus hemionus) in the Kern River population in California. They were developed from 69 migration sequences collected from a sample size of 27 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, johnsondale, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bd6d34ebe442507ce83
Organization: Department of the Interior
California Mule Deer Kern River Routes

The Kern River deer herd includes primarily California mule deer (Odocoileus hemionus californicus), but some Inyo mule deer (Odocoileus hemionus inyoensis) associate with California mule deer on the summer range. The population size peaked at 11,000 individuals in 1949, but in recent decades numbers have decreased to an estimated 3,500 deer in 1995 and 2,000 deer in 2001. The population size estimate is now, conservatively, approximately 4,000 individuals owing primarily to habitat expansion by the 2001 McNally Fire (California Department of Fish and Wildlife unpublished data). The Kern River herd winters in Sequoia National Forest north of Johnsondale and east of Slate Mountain. In the spring, they migrate northward to an area by Redrocks Meadows and along the Kern Canyon ridgeline to their summer range in Sequoia National Park. The herd’s annual range spans the watersheds of the Kern and Little Kern rivers in eastern Tulare County. Elevations range from 2,500 ft on the southern slopes of the winter range to over 11,000 ft on the northern summer range. Telemetry data over the past two decades show considerable mixing between this herd and the Manache herd on their summer ranges. Further research may support the hypothesis that these herds are actually sub-herds of a larger population.
These mapping layers show the location of the migration routes for mule deer (Odocoileus hemionus) in the Kern River population in California. They were developed from 69 migration sequences collected from a sample size of 27 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, johnsondale, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bd1d34ebe442507ce81
Organization: Department of the Interior
California Mule Deer Kern River Corridors

The Kern River deer herd includes primarily California mule deer (Odocoileus hemionus californicus), but some Inyo mule deer (Odocoileus hemionus inyoensis) associate with California mule deer on the summer range. The population size peaked at 11,000 individuals in 1949, but in recent decades numbers have decreased to an estimated 3,500 deer in 1995 and 2,000 deer in 2001. The population size estimate is now, conservatively, approximately 4,000 individuals owing primarily to habitat expansion by the 2001 McNally Fire (California Department of Fish and Wildlife unpublished data). The Kern River herd winters in Sequoia National Forest north of Johnsondale and east of Slate Mountain. In the spring, they migrate northward to an area by Redrocks Meadows and along the Kern Canyon ridgeline to their summer range in Sequoia National Park. The herd’s annual range spans the watersheds of the Kern and Little Kern rivers in eastern Tulare County. Elevations range from 2,500 ft on the southern slopes of the winter range to over 11,000 ft on the northern summer range. Telemetry data over the past two decades show considerable mixing between this herd and the Manache herd on their summer ranges. Further research may support the hypothesis that these herds are actually sub-herds of a larger population.
These mapping layers show the location of the migration corridors for mule deer (Odocoileus hemionus) in the Kern River population in California. They were developed from 69 migration sequences collected from a sample size of 27 animals comprising GPS locations collected every 2 hours.

Tags: animal-behavior, biota, california, johnsondale, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bcdd34ebe442507ce7f
Organization: Department of the Interior
California Mule Deer Grizzly Flat Routes

The Grizzly Flat herd winters in the western foothills of the Sierra Nevada near Grizzly Flats, California. The winter range includes conifer, vineyards, and oak woodland that is shared with a resident portion of the herd on a mix of private and public lands. In the spring, the Grizzly Flat herd migrates east to higher elevation terrain in the El Dorado National Forest, staying south of Interstate 50 and primarily north of U.S. Highway 88, to the crest of the Sierra Nevada. The summer range contains primarily mixed conifer opening up to high alpine granite near the crest of the Sierra Nevada. Although the population size of the Grizzly Flat herd is unknown due to limited surveys, it is considered stable to declining, affected primarily by dense overstory, environmental stressors, and habitat loss. This GPS collaring project was designed as part of a region-wide effort to obtain abundance estimates for deer using fecal DNA and home range analyses, with pinpointing migration routes and identifying winter ranges a secondary priority. Due to the small sample size of GPS-tagged mule deer, additional migration routes and winter ranges probably exist beyond the extent of our model output.
These mapping layers show the location of the migration routes for mule deer (Odocoileus hemionus) in the Grizzly Flat population in California. They were developed from 16 migration sequences collected from a sample size of 5 animals comprising GPS locations collected every 1-13 hours.

Tags: animal-behavior, biota, california, grizzly-flats, migration-organisms, migration-route, migratory-species, united-states, usgs-63650bc1d34ebe442507ce79
Organization: Department of the Interior