AndreaBozzo/ceres-open-data-index huggingface dataset:
Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149)

The data included in this package were conducted as part of a Natural Resource Damage Assessment (NRDA) addressing historical pollution at the designated Superfund site. The National Oceanic and Atmospheric Administration (NOAA) evaluated contaminant-related effects from dietary exposure to environmentally relevant concentrations and mixture profiles in juvenile Chinook salmon using two endpoints: growth assessment and disease susceptibility. The dose and chemical proportions were determined from the stomach contents of Laboratory-reared juvenile Chinook salmon recently collected from contaminated waterways. Groups of fish were fed a mixture with fixed proportions of polychlorinated biphenyls (PCBs), dichlorodiphenyltrichloroethanes (DDTs), and polycyclic aromatic hydrocarbons (PAHs) at five concentrations for 35 days.


Data is provided in three spreadsheets in 0-data/Data/ directory and include the length , weight, otoliths, and tissue chemistry of composite samples of lab-raised juvenile Chinook salmon. The corresponding data dictionary for the headers is located in 0-data/Documentation/DataDictionary/ and describes the specific chemical, biological, instruments, etc. codes. Metadata XML files describing the sampling processing procedures are provided in the 0-data/Metadata for each respective experiment. The file 0-data/Data/readme.txt describes the data package and contents of each directory in more detail.

Tags: 64w8b4, analytical chemistry, chemsitry, disciplines, gcmd - other keywords, gcms, oceanography, oregon, portland, portland harbor, tissue chemistry, va, water quality, willamette river
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from HMS Loch Insh in the Arabian Sea, Gulf of Aden, and others from 1960-04-25 to 1960-09-19 (NCEI Accession 7501164)

This dataset includes bathythermograph (MBT) data from HMS Loch Insh in the Arabian Sea, Gulf of Aden, Gulf of Oman, and Red Sea from 1960-04-25 to 1960-09-19.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Water temperature, salinity, nutrients, velocity, and others taken by CTD, ADCP and other instrumentation from research vessel icebreaker Xuelong in the North Pacific Ocean, Arctic Ocean, and Bering Sea from 2014-07-22 to 2014-08-04 (NCEI Accession 0221081)

This dataset contains water temperature, salinity, nutrients, velocity, and others taken by CTD, ADCP and other instrumentation from research vessel icebreaker Xuelong in the North Pacific Ocean, Arctic Ocean, and Bering Sea from 2014-07-22 to 2014-08-04. The objectives of The 6th Chinese National Arctic Scientific Research Expedition were to improve understanding of basic environmental information of marine hydrology in high latitude areas. The China Arctic Expedition of 2014 (Chinare 2014) campaign was designed to provide basic information for global climate change research. The main work was undertaken through sectional observations of the above mentioned sea areas. During the 6th Chinese National Arctic Research Expedition, about 14 days (2014.7.22â2014.8.4) had been taken to investigate the marine physical, chemical oceanography and biological ecology, as well as marine geology. Different parameters had been observed, including 53 CTD sites, 53 LADCP sites, 12 Chlorophyll sites, 19 Zooplankton sites and 22 Nutrients sites. Besides, 16 sedimentary cores or surface sediments had been collected.

These data are submitted as part of the World Data Service for Oceanography, Marine Research data U2014-022.

Data are in text, XLS, and binary formats.

Tags: 6ty4km, oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon (DIC), total alkalinity (TA), temperature, salinity, oxygen, nutrient, and CTD data collected from discrete profile measurements during Sound to Sea cruise TN281 (EXPOCODE 325020120525) on R/V Thomas G. Thompson from 2012-05-25 to 2012-05-26 (NCEI Accession 0206907)

This dataset contains data collected from the Sound to Sea cruise that took place from 2012-05-25 to 2012-05-26 aboard the R/V Thomas G. Thompson. Six time-series stations were occupied in the Salish Sea and adjoining coastal waters in Washington State marine waters. The cruise was designed to obtain a synoptic snapshot of key carbon, physical, and other biogeochemical parameters as they relate to ocean acidification (OA) in Washington's estuarine and coastal environments. At all sampling stations, CTD casts were conducted to measure temperature, conductivity, pressure, and oxygen concentrations using CTD and oxygen sensors. Discrete water samples were collected throughout the water column at all stations in Niskin bottles. Laboratory analyses were run to measure dissolved inorganic carbon (DIC), oxygen, and nutrient concentrations and total alkalinity. More information--including a map of stations occupied during this cruise (and other Salish cruises), full-resolution CTD downcast data for all stations sampled, chlorophyll and phaeopigment concentrations, and other sensor data--can be found at nvs.nanoos.org/CruiseSalish by exploring the Map, Data, and Plots tabs. This effort was conducted in support of the estuarine and coastal monitoring and research objectives of the University of Washington (UW) Puget Sound Regional Synthesis Model (PRISM) program and conforms to climate-quality monitoring guidelines of the Global Ocean Acidification Observing Network (goa-on.org) and the U.S. National Oceanic and Atmospheric Administration's Ocean Acidification Program. The official R/V Thomas G. Thompson code for this cruise is TN281, with support for shiptime from PRISM and the UW School of Oceanography.

Tags: 325020120525, ammonia_umol_kg, ammonium_umol_l, california current system, cruise_id, ctd_oxy_mg_l, ctdoxy_umol_kg_adj, ctdprs_dbar, ctdsal_pss78, ctdtmp_its90_deg_c, date_local, date_utc, dic_umol_kg, discrete measurement, latitude_dec, longitude_dec, niskin_no, nitrate_umol_kg, nitrate_umol_l, nitrite_umol_kg, nitrite_umol_l, north pacific ocean, ocean carbon and acidification data system (ocads) project, oceanography, oxygen_mg_l_1, oxygen_mg_l_2, oxygen_mg_l_3, oxygen_umol_kg, phosphate_umol_kg, phosphate_umol_l, pmel carbon program (pmel-co2), puget sound, puget sound regional synthesis model (prism), salish sea, sigmatheta_kg_m3, silicate_umol_kg, silicate_umol_l, sound to sea, station_no, strait of juan de fuca, ta_umol_kg, time series, time_local, time_utc, tn281, u.s. west coast, washington
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
U.S. Marine Protected Area (MPA) Boundaries Inventory 2017 (NCEI Accession 0209248)

The MPA Inventory is a comprehensive GIS catalog that provides detailed information for existing marine protected areas in the United States in 2017. The inventory provides geospatial boundary information (in polygon format) and classification attributes that seek to define the conservation objectives, protection level, governance and related management criteria for all sites in the database. The comprehensive inventory of federal, state and territorial MPA sites provides governments and stakeholders with access to information to make better decisions about the current and future use of place-based conservation.

Tags: kgw917, marine boundaries, marine conservation areas, marine protected areas, mpa inventory - u.s. marine protected area boundaries 2017, national marine protected areas center, north america, ocean conservation, oceanography, united states, united states marine waters, water - oceans and coasts
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (XBT) data from CHICAGO in the South China Sea from 1970-10-16 to 1970-10-17 (NCEI Accession 7001315)

This dataset includes bathythermograph (XBT) data from CHICAGO in the South China Sea from 1970-10-16 to 1970-10-17.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Water temperature, carbonate chemistry, and growth rates of Acropora cervicornis from the Florida keys, 2014-05-23 to 2016-07-26 (NCEI Accession 0164322)

Data were collected as part of the CRCP-funded project "Coral restoration in natural ocean acidification refugia." Carbonate chemistry parameters and temperature data describe environmental conditions incident on Acropora cervicornis nursery and outplanting sites throughout the Florida Keys and Dry Tortugas. Growth data are periodic measurement of colony total linear extent (TLE).

Tags: 1123, acpgcl, alkalinity, atlantic ocean, biology, biosphere, biscayne (25n080w0001), biscayne bay, calculated co2sys, carbonate chemistry, chemistry, coral growth, coral restoration in natural ocean acidification refugia, corals, country/territory, dade county, dry tortugas, dry tortugas (24n082w0001), earth science, florida, florida keys (24n081w0007), florida reef tract, inorganic carbon, lower florida keys (24n081w0021), middle florida keys, middle florida keys (24n081w0019), monroe county, north atlantic ocean, numeric data sets, ocean basin, ocean chemistry, ocean temperature, oceanography, oceans, ph, salinity, salinity/density, total linear extent (tle), united states of america, water temperature, zoology
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Nonindigenous Marine Species Introductions in the harbors of the South and West Shores of Oahu, Hawaii 1997-1998 (NCEI Accession 0000324)

Despite the potential importance of Honolulu Harbor or other commercial harbors on Oahu as potential gateways for nonindigenous marine species to enter the Hawaiian marine ecosystem, no studies have previously been conducted of introduced species in Hawaiian commercial harbors, and little information is available for the composition of the marine communities for these harbors. Therefore, we conducted surveys in Honolulu Harbor and Keehi Lagoon in 1997, and in Kewalo Basin, the Ala Wai Yacht Harbor and the Barbers Point Deep Draft Harbor in 1998.  The results of this study are reported herein and the presence and impact of nonindigenous marine introductions in these harbors are evaluated.

This report includes an extensive bibliography of related work in these harbors, historical maps, a chronology of important events in these harbors, and the field data.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Phytoplankton, chemical, and other data from bottle and CTD casts in the North Atlantic Ocean from 04 August 1989 to 07 September 1989 (NCEI Accession 0000399)

Phytoplankton, chemical, nutrients, salinity, and other data from August 4, 1989 to September 7, 1989. Data were collected using bottle and CTD casts in the North Atlantic Ocean.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Hydrocarbons and other data from H. J. W. FAY and VIRGINIAN SEA from 1976-11-04 to 1977-03-13 (NCEI Accession 7800477)

This dataset includes hydrocarbons data from H. J. W. FAY and VIRGINIAN SEA in the North Atlantic Ocean from 1976-11-04 to 1977-03-13.

Data has been processed by NODC to the NODC standard Hydrocarbons (F010) format.

The F010 format is used to support hydrocarbon studies in zooplankton and bottom sediments. Included are cruise information, station information, species, and aliphatic and aromatic hydrocarbon weights and concentrations.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
RFR-LME Ocean Acidification Indicators from 1998 to 2024 (NCEI Accession 0287551)

Dataset Description: Gridded monthly data products of surface ocean acidification indicators from 1998 to 2024 and on a 0.25Â° by 0.25Â° spatial grid have been developed for eleven U.S. Large Marine Ecosystems (LMEs) using a machine learning algorithm called random forest regression (RFR). The data products are called RFR-LMEs, and were constructed using observations from the Surface Ocean CO2 Atlas â co-located with surface ocean properties from various satellite, reanalysis, and observational products â with an approach that utilized two types of machine learning algorithms: (1) Gaussian mixture models to cluster the data into subregions with similar environmental variability and (2) RFRs that were trained and applied separately in each cluster to interpolate the observational data in space and time. RFR-LMEs also rely on previously published seawater property estimation routines to obtain the full suite of ocean acidification indicators. The products show a domain-wide carbo
 n dioxide partial pressure increase of 1.6 Â± 0.4 Î¼atm yrâ1 and pH decrease of 0.0015 Â± 0.0004 yrâ1. More information on the creation and validation of RFR-LMEs is available in the following publication: Sharp, J.D., Jiang, L., Carter, B.R., Lavin, P.D., Yoo, H., Cross, S.L., 2024. A mapped dataset of surface ocean acidification indicators in large marine ecosystems of the United States. Scientific Data, 11, 715, 10.1038/s41597-024- 03530-7.

Tags: arctic ocean, atlantic ocean, co3, dic, fco2, h, model output, ocean acidification program (oap), ocean carbon and acidification data system (ocads) project, oceanography, omega_aragonite, omega_calcite, pacific ocean, pco2, ph, rf, ta
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using Alkalinity titrator, CTD and other instruments from HUDSON in the Davis Strait, Labrador Sea and North Atlantic Ocean from 2005-05-26 to 2005-06-17 (NCEI Accession 0108221)

This dataset includes chemical, discrete sample, physical and profile data collected from HUDSON in the Davis Strait, Labrador Sea and North Atlantic Ocean from 2005-05-26 to 2005-06-17. These data include CHLOROFLUOROCARBON-11 (CFC-11), CHLOROFLUOROCARBON-113 (CFC-113), CHLOROFLUOROCARBON-12 (CFC-12), Carbon tetrachloride (CCL4), DISSOLVED INORGANIC CARBON (DIC), DISSOLVED OXYGEN, HYDROSTATIC PRESSURE, NITRATE, Potential temperature (theta), SALINITY, TOTAL ALKALINITY (TA), WATER TEMPERATURE, methyl chloroform (MC), nitrate + nitrite content (concentration), phosphate and silicate. The instruments used to collect these data include Alkalinity titrator, CTD, Coulometer for DIC measurement and bottle.

These data were collected by Robert Gershey of BDR Research Ltd (BDR) and E. Peter Jones of Bedford Institute of Oceanography (BIO) as part of the CLIVAR_AR07W_2005 dataset. CDIAC associated the following cruise ID(s) with this dataset: CLIVAR_AR07W_2005

The International CLIVAR Global Ocean Carbon and Repeat Hydrography Program carries out a systematic and global re-occupation of select WOCE/JGOFS hydrographic sections to quantify changes in storage and transport of heat, fresh water, carbon dioxide (CO2), and related parameters.

Tags: 18hu20050526, alkali, atlantic ocean, ccl4, cfc-11, cfc-12, cfc113, clivar ar07w, clivar_ar07w_2005, ctdoxy, ctdsal, ctdtmp, dic, discrete measurement, hud2005-016, no2+no3, ocean carbon and acidification data system (ocads) project, oceanography, oxygen, phspht, profile, salnty, silcat, ta, tcarbn
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Temperature profile and water depth collected from ZAMBEZE and other platforms using BT and XBT casts in the Atlantic Ocean from 1981-07-21 to 1985-12-02 (NCEI Accession 8600293)

Temperature profile and water depth data were collected using BT and XBT casts from the ZAMBEZE and other platforms in the Northeast / Southwest Atlantic Ocean. Data were collected from 21 July 1981 to 02 December 1985 by Office De La Recherche Scientifique Et Technique Outre Mer in Brest, France with support from the Seasonal Response of the Equatorial Atlantic Experiment / FranÃ§ais Ocean Et Climat Dans L'Atlantique Equatorial (SEQUAL/FOCAL) project.

Data has been processed by NODC to the NODC standard Bathythermograph (XBT) (C116) format.

The C116/C118 format contains temperature-depth profile data obtained using expendable bathythermograph (XBT) instruments. Cruise information, position, date and time were reported for each observation. The data record was comprised of pairs of temperature-depth values. Unlike the MBT Data File, in which temperature values were recorded at uniform 5 m intervals, the XBT data files contained temperature values at non-uniform depths. These depths were recorded at the minimum number of points ("inflection points") required to accurately define the temperature curve. Standard XBTs can obtain profiles to depths of either 450 or 760 m. With special instruments, measurements can be obtained to 1830 m. Prior to July 1994, XBT data were routinely processed to one of these standard types. XBT data are now processed and loaded directly in to the NODC Ocean Profile Data Base (OPDB). Historic data from these two data types were loaded into the OPDB.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Chemical and physical oceanographic profile data collected from CTD casts aboard the Meg L. Skansi in the Gulf of Mexico from 2010-09-04 to 2010-09-13 in response to the Deepwater Horizon oil spill event (NCEI Accession 0069076)

Chemical and physical oceanographic profile data were collected aboard the Meg L. Skansi in the Gulf of Mexico from 2010-09-04 to 2010-09-13 in response to the Deepwater Horizon oil spill event on April 20, 2010, by the Subsurface Monitoring Unit (SMU), which consists of multiple government and corporate agencies.  These data include CDOM fluorescence, conductivity, dissolved oxygen, hydrostatic pressure, salinity, sound velocity, temperature and water density.  The instruments used to collect these data were CTD, fluorometer and oxygen meter.  These data have undergone quality assurance and control procedures to validate their scientific integrity at the National Coastal Data Development Center.

Tags: cdom_fluorescence_fleco, cdom_fluorescence_wetcdom, conductivity, ctd, deepwater horizon, density, depth, doxy_mass, doxy_vol, dwh, fluorescence, gulf coast, gulf of mexico, mississippi canyon, oceanography, oil spill, oxygen, pressure, sal, salinity, sea-bird sbe 19 plus v2 seacat profiler, sea-bird sbe 43 dissolved oxygen (do) sensor, sound_vel, state of louisiana, state of mississippi, temp, temperature, wet labs cdom fluorometer, wet labs eco fluorometer
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Bathythermograph (MBT) data from ATLANTIS II, DELAWARE, and others in the North Atlantic Ocean and South Atlantic Ocean from 1966-09-24 to 1968-10-31 (NCEI Accession 6900137)

This dataset includes bathythermograph (MBT) data from ATLANTIS II, DELAWARE, DOLPHIN, L/S BARNEGAT, L/S BOSTON, L/S DELAWARE, L/S FIVE FATHOM BANK, L/S FRYING PAN SHOALS, L/S NANTUCKET, and L/S PORTLAND in the North Atlantic Ocean and South Atlantic Ocean from 1966-09-24 to 1968-10-31.

Data has been processed by NODC to the NODC standard Bathythermograph (MBT) (C128) format.

The C128 format is used for temperature-depth profile data obtained using the mechanical bathythermograph (MBT) instrument. The maximum depth of MBT observations is approximately 285 m. Therefore, MBT data are useful only in studying the thermal structure of the upper layers of the ocean. Cruise information, date, position, and time are reported for each observation. The data record comprises pairs of temperature-depth values. Temperature data in this file are recorded at uniform 5 m depth intervals.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Benthic habitat data for Wawaloi and Keei, Kona Coast, Island of Hawaii, August 2004 (NCEI Accession 0070530)

Transects were made at two locations on the west side of the Island of Hawaii in August 2004 to study the structure and composition of the benthic habitat.  Photoquadrats were established to quantify the percent of the benthic substrate occupied by coral and algal species, through use of Coral Point Count with Excel Extensions.  Rugosity along each transect was also calculated.  The transects were 15 m in length with photoquadrats at each meter mark.  Each set of transects at each site consists of 10 15-m long transects running ~parallel to the shore, with ends of all transects aligned, and transects spaced 10 m apart along the vertical profile of the reef from the reef flat to the sandy interface at a depth of ~25 m.  Quantified data provided in Excel spreadsheets.  Original JPEG images from the photoquadrats are given as well, for future users to have the opportunity to apply other methods of quantifying the benthos.

Tags: algae per cent cover, algal species, benthic data, benthic habitat, biological data, coastal data, coral reef, coral reef per cent cover, coral reef species, hawaii, invertebrate species, island of hawaii, keei, kona coast, north pacific, oceanography, rugosity, substrate type, wawaloli
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Temperature profile data collected using CTD casts from the CHAIN from the Atlantic Ocean during the International Decade of Ocean Exploration / Mid-Ocean Dynamics Experiment (IDOE/MODE) project from 1973-04-14 to 1973-06-20 (NCEI Accession 7400161)

Temperature profile data were collected using CTD casts from the CHAIN in the Atlantic Ocean from April 8, 1973 to June 21, 1973. Data were submitted by Woods Hole Oceanographic Institution as part of the International Decade of Ocean Exploration / Mid-Ocean Dynamics Experiment (IDOE/MODE) project.

Tags: oceanography
Organization: National Oceanic and Atmospheric Administration, Department of Commerce