AndreaBozzo/ceres-open-data-index huggingface dataset:
NIST Chemical Kinetics Database

The NIST Chemical Kinetics Database includes essentially all reported kinetics results for thermal gas-phase chemical reactions. The database is designed to be searched for kinetics data based on the specific reactants involved, for reactions resulting in specified products, for all the reactions of a particular species, or for various combinations of these. In addition, the bibliography can be searched by author name or combination of names. The database contains in excess of 38,000 separate reaction records for over 11,700 distinct reactant pairs. These data have been abstracted from over 12,000 papers with literature coverage through early 2000. Rate constant records for a specified reaction are found by searching the Reaction Database. All rate constant records for that reaction are returned, with a link to 'Details' on that record. Each rate constant record contains the following information (as available): a) Reactants and, if defined, reaction products; b) Rate parameters: A, n, Ea/R, where k = A* (T/298)**n exp[-(Ea/R)/T], where T is the temperature in Kelvins; c) Uncertainty in A, n, and Ea/R, if reported; d) Temperature range of experiment or temperature range of validity of a review or theoretical paper; e) Pressure range and bulk gas of the experiment; f) Data type of the record (i.e., experimental, relative rate measurement, theoretical calculation, modeling result, etc.). If the result is a relative rate measurement, then the reaction to which the rate is relative is also given; g) Experimental procedure, including separate fields for the description of the apparatus, the time resolution of the experiment, and the excitation technique. A majority of contemporary chemical kinetics methods are represented. The Kinetics Database is being expanded to include other resources for the convenience of the users. Presently this includes direct links to the corresponding NIST WebBook page for all substances for which such a link is possible. This is indicated by underling and highlighting the species. The WebBook provides thermodynamic, spectral, and other data on the species. Note that the link to the WebBook is opened as a new frame in your browser.

Tags: arrhenius-equation, chemical-kinetics, chemical-reaction, kinetics, kinetics-database, nist-chemical-kinetics-database, rate-coefficient, rate-constant, reaction, reaction-kinetics, reaction-rate-constant
Organization: National Institute of Standards and Technology
Evaluation of Variability across Rat Acute Oral Systemic Toxicity Studies

Dataset for Karmaus et al. journal article 'Evaluation of Variability across Rat Acute Oral Systemic Toxicity Studies', published in Toxicological Sciences in July 2022 ( https://doi.org/10.1093/toxsci/kfac042). The Excel data file is from the following link in the article: 
The compiled data allowed for comprehensive characterization of the variability and performance for the rat acute oral toxicity study. The data set is available for download via the National Toxicology Program’s Integrated Chemical Environment (https://ice.ntp.niehs.nih.gov/). 

This dataset is associated with the following publication:
Karmaus, A., K. Mansouri, K. To, B. Blake, J. Fitzpatrick, J. Strickland, G. Patlewicz, D. Allen, W. Casey, and N. Kleinstreuer. Evaluation of Variability Across Rat Acute Oral Systemic Toxicity Studies.   TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA,  188(1): 34-47, (2022).

Tags: acute-toxicity, establishing-confidence, in-vivo-variability, ld50
Organization: U.S. Environmental Protection Agency
Diagnostic Fragmentation Pathways for Identification of Phthalate Metabolites in Nontargeted Analysis Studies

Prioritized candidate molecular ions in the pooled urine spiking Level-0 (Table S1) prioritized candidate molecular ions in the pooled urine spiking Level-I (Table S2), prioritized candidate molecular ions in the pooled urine spiking Level-II (Table S3), and TIC and EICs of m/z 121.0295 from the DIA data of the pooled urine sample spiked with 100 ppb of 24 metabolite standards at a collision energy of 0, 10, 20, and 40 V, respectively (Figure S1)

Tags: environmental-health, exposome-and-exposomics, mass-spectrometry, non-targeted-analysis, phthalate-metabolites
Organization: U.S. Environmental Protection Agency
One-third Octave Band Sound Pressure Levels at 1 Hertz and 1 Hour Resolution Recorded at SanctSound Site PHRB_12_Part3

This record represents the one-third octave band sound pressure levels (TOLs) derived from raw passive acoustic data. TOLs were calculated by integration of sound pressure spectral density estimates of the mean-square pressure with a 1 Hz/1 second resolution over 30 one-third octave bands with the nominal center frequencies ranging from 25 to 20,000 Hz. The result is then calculated per hour as a median over no less than 1800 1-second values for that hour and converted to decibels (dB re 1 ÂµPa). These data were recorded at SanctSound site PHRB_12 between October 15, 2018 and June 10, 2019, and represent 3 of 3 parts.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, central pacific ocean, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, fish, fisheries, fixed observation stations, hawaiian islands, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Humpback Whale Sound Production Recorded at Monterey Bay Aquarium Research Institute Monterey Accelerated Research System

This record represents humpback whale detection from recordings at the Monterey Accelerated Research System (MARS) cabled observatory. MARS resides on the continental slope outside Monterey Bay, California at a depth of 890 m. It's location is in the center of Monterey Bay National Marine Sanctuary. Since 28 July 2015, MARS has supported nearly continuous sound recording at a sample rate of 256 kHz. Long term spectral averages with a resolution of 5 seconds/1 Hz were manually scanned using consistent intensity and contrast settings throughout the time-series. Visual detections were paired with model scores from the NOAA / Google humpback song detector (Allen et al., 2021). Aural verification of the recording was used when analysts were uncertain of the result. The analysis period for these detection is standardized across SanctSound sites to allow for direct comparison.These data were recorded at SanctSound Monterey Accelerated Research System between November 01, 2018 and October 31, 2020.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Fin Whale Sound Production Recorded at SanctSound Site SB02_03

This record represents fin whale sound production detected from raw passive acoustic data. The Low Frequency Detection and Classification System (LFDCS) call library for fin whale 20-Hz pulses was built for the data sampled at 120 Hz. All fin whale detections with a Mahalanobis distance of 3.0 or less were manually verified for true detections. A logistic regression was applied to these results to facilitate reducing the size of the dataset that ultimately needed to be manually verified for confident species detection. This analysis revealed that a minimum number of 29 detections per time window used (hour or day) need to be detected to ensure that a fin whale was truly detected with a confidence of 90%. All days with at least 29 detections were manually verified for daily presence of fin whale 20-Hz pulses. From days with 29 or more detections, fin whales were considered present for that day if a true detection was found within a regular inter-pulse interval pattern of at least three other 20-Hz pulses. These data were recorded at SanctSound site SB02_03 between April 2, 2019 and June 1, 2019.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, atlantic ocean, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, north atlantic ocean, ocean, ocean acoustics, oceans, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Dataset for the study investigating respiratory and cardiovascular benefits of fish oil or olive oil supplementation against acute exposure to ozone in young healthy adults

This study is a randomized trial to investigate whether dietary supplementation with fish oil or olive oil modulate respiratory and cardiovascular effects of acute exposure to ozone in a controlled exposure chamber in young healthy adults. The dataset contains all the data for the outcome variables. 

This dataset is associated with the following publication:
Chen, H., H. Tong, W. Shen, T. Montilla, M. Case, M. Almond , H. Wells, N. Alexis , D. Peden , A. Rappold, D. Diazsanchez, R. Devlin, P. Bromberg , and J. Samet. Fish oil blunts lung function decrements induced by acute exposure to ozone in young healthy adults: A randomized trial.   ENVIRONMENT INTERNATIONAL. Elsevier B.V., Amsterdam,  NETHERLANDS, 167(107407): 1, (2022).

Tags: cardiovascular-effects, controlled-human-exposure, fish-oil, lung-function, olive-oil, omega-3-fatty-acid, ozone
Organization: U.S. Environmental Protection Agency
Fin Whale Sound Production Recorded at SanctSound Site SB03_01

This record represents fin whale sound production detected from raw passive acoustic data. The Low Frequency Detection and Classification System (LFDCS) call library for fin whale 20-Hz pulses was built for the data sampled at 120 Hz. All fin whale detections with a Mahalanobis distance of 3.0 or less were manually verified for true detections. A logistic regression was applied to these results to facilitate reducing the size of the dataset that ultimately needed to be manually verified for confident species detection. This analysis revealed that a minimum number of 29 detections per time window used (hour or day) need to be detected to ensure that a fin whale was truly detected with a confidence of 90%. All days with at least 29 detections were manually verified for daily presence of fin whale 20-Hz pulses. From days with 29 or more detections, fin whales were considered present for that day if a true detection was found within a regular inter-pulse interval pattern of at least three other 20-Hz pulses. These data were recorded at SanctSound site SB03_01 between November 12, 2018 and January 22, 2019.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, atlantic ocean, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, north atlantic ocean, ocean, ocean acoustics, oceans, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Fin Whale Sound Production Recorded at Monterey Bay Aquarium Research Institute Monterey Accelerated Research System

This record represents fin whale detection from recordings at the Monterey Accelerated Research System (MARS) cabled observatory. MARS resides on the continental slope outside Monterey Bay, California at a depth of 890 m. It's location is in the center of Monterey Bay National Marine Sanctuary. Since 28 July 2015, MARS has supported nearly continuous sound recording at a sample rate of 256 kHz. Long term spectral averages with a resolution of 5 seconds/1 Hz were manually scanned using consistent intensity and contrast settings throughout the time-series. Visual detections were paired with examination of the fin whale call index (Sirovic et al., 2015). The analysis period for these detection is standardized across SanctSound sites to allow for direct comparison.These data were recorded at SanctSound Monterey Accelerated Research System between November 01, 2018 and October 31, 2020.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
One-third Octave Band Sound Pressure Levels at 1 Hertz and 1 Hour Resolution Recorded at SanctSound Site MB03_02

This record represents the one-third octave band sound pressure levels (TOLs) derived from raw passive acoustic data. TOLs were calculated by integration of sound pressure spectral density estimates of the mean-square pressure with a 1 Hz/1 second resolution over 30 one-third octave bands with the nominal center frequencies ranging from 25 to 20,000 Hz. The result is then calculated per hour as a median over no less than 1,800 1-second values for that hour and converted to decibels (dB re 1 ÂµPa). These data were recorded at SanctSound Site MB03_02 between June 11, 2019 and January 25, 2020.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, eastern pacific ocean, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, ocean, ocean acoustics, oceans, pacific ocean, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Fin Whale Sound Production Recorded at SanctSound Site FK04_01

This record represents fin whale sound production detected from raw passive acoustic data. The Low Frequency Detection and Classification System (LFDCS) call library for fin whale 20-Hz pulses was built for the data sampled at 120 Hz. All fin whale detections with a Mahalanobis distance of 3.0 or less were manually verified for true detections. A logistic regression was applied to these results to facilitate reducing the size of the dataset that ultimately needed to be manually verified for confident species detection. This analysis revealed that a minimum number of 29 detections per time window used (hour or day) need to be detected to ensure that a fin whale was truly detected with a confidence of 90%. All days with at least 29 detections were manually verified for daily presence of fin whale 20-Hz pulses. From days with 29 or more detections, fin whales were considered present for that day if a true detection was found within a regular inter-pulse interval pattern of at least three other 20-Hz pulses. These data were recorded at SanctSound site FK04_01 between January 8, 2019 and April 17, 2019.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, atlantic ocean, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, north atlantic ocean, ocean, ocean acoustics, oceans, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Sei Whale Sound Production Recorded at SanctSound Site SB03_04

This record represents sei whale sound production detected from raw passive acoustic data. The Low Frequency Detection and Classification System (LFDCS) call library contains the 82 â 34 Hz sei whale downsweeps, which was the call type we focused on in this study. All sei whale downsweep detections with a Mahalanobis distance of 3.0 or less were manually screened for the daily presence of a doublet or triplet, doublets and triplets were defined as 2 or 3 repeated downsweeps, respectively, with roughly 3.5 seconds elapsed between the start of successive calls. Sei whales were considered present if a true detection (at least one downsweep detected within a doublet or triplet) was found for that day. Only the occurrence of the downsweeps as doublet or triplets were selected to ensure confidence in species identification. These data were recorded at SanctSound site SB03_04 between June 1, 2019 and August 2, 2019.

Tags: acoustic sounders, ambient noise, animals/invertebrates, animals/vertebrates, aquatic ecosystems, aquatic sciences, atlantic ocean, biological classification, biosphere, cetaceans, doc/noaa/nesdis/ncei, doc/noaa/nmfs, doc/noaa/nos/nms, dod/usnavy, earth science, earth science oceans, fish, fisheries, fixed observation stations, hydrophones, mammals, marine environment monitoring, marine habitat, national centers for environmental information, national marine fisheries service, national marine sanctuaries, national ocean service, nesdis, noaa, noaa-navy sanctuary soundscapes monitoring project, north atlantic ocean, ocean, ocean acoustics, oceans, passive acoustic recorder, recorders/loggers, sanctsound, u.s. department of commerce, u.s. department of defense, u.s. navy, vertical location, water column
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Buoy - California - Wind Sentinel (130), Morro Bay - Raw Data

**Overview**

Deployment off the coast of Morro Bay, California

**Data Details**

Buoy Data Files name like:  
 buoy.z06.00.20200929.000000.currents.csv  
 buoy.z06.00.20200929.000000.gill.csv  
 buoy.z06.00.20200929.000000.gps.csv  
 buoy.z06.00.20200929.000000.pressure.csv  
 buoy.z06.00.20200929.000000.rh.csv  
 buoy.z06.00.20200929.000000.temperature.csv  
 buoy.z06.00.20200929.000000.waves.csv  
GX5 data:  
buoy.z06.00.20200930.194800.gnss.bin  
buoy.z06.00.20200930.194800.imu.bin

**Data Quality**

More information to follow.

Tags: 00, a2e, atmosphere-to-electrons, buoy, california, eere, offshore-wind-energy-buoy-lidar-project, raw-data, weto, wind, wind-sentinel-130-morro-bay, z06
Organization: Department of Energy
Buoy - California - Wind Sentinel (130), Morro Bay - Processed Data

**Overview**

The purpose of the dataset is to provide preliminary filtered, averaged buoy data and standardize the data format of various data streams from the buoy into NetCDF.  The attached Lidar Buoy Data Dictionary provides further details on the various instruments mounted on the buoys, parameters measured by each instrument, and the frequency of data collection.

**Data Details**

Surface meteorology instrument directions are not correct for majority of the deployment because faulty inertial measurement unit (IMU) data was used for heading calculations.  These directions will be reprocessed using the high frequency GX5-45 IMU data at the end of the campaign and the directions will be updated.

**Data Quality**

Standard filtering thresholds on the averaged data were applied and several data format issues of the raw data were streamlined to create a standardized NetCDF format data.

**Uncertainty**

The uncertainty of data has not been analyzed, but it is not expected to deviate from instrument technical specifications.

Tags: a0, a2e, atmosphere-to-electrons, buoy, california, eere, offshore-wind-energy-buoy-lidar-project, processed-data, weto, wind, wind-sentinel-130-morro-bay, z06
Organization: Department of Energy
Lidar - California - Leosphere Windcube 866 (120), Humboldt - Processed Data

**Overview**

The purpose of this dataset is to provide preliminary filtered, averaged lidar data and standardize the data format of various datastreams from the buoy into NetCDF.

**Data Quality**

Standard filtering thresholds on the averaged data were applied and several data format issues of the raw data were streamlined to create a standardized NetCDF format data.

**Uncertainty**

The uncertainty of lidar data has not been analyzed, but they are not expected to deviate from instrument technical specifications.

Tags: a0, a2e, atmosphere-to-electrons, buoy, california, eere, leosphere-windcube-866-120-humboldt, lidar, offshore-wind-energy-buoy-lidar-project, processed-data, weto, wind, z05
Organization: Department of Energy