AndreaBozzo/ceres-open-data-index huggingface dataset:
Water Quality and Macroinvertebrate Data Northern Alaska, 2007

Open-water areas that persist along rivers and lakes during arctic winters can be considered “islands” of open-water embedded within a frozen land. These open-water islands are associated with areas of groundwater inflow, and as a result exhibit relatively stable thermal regimes throughout the year. Their persistence is vital to the fitness and survival of many arctic organisms; thus, these habitats are an invaluable part of GAAR ecosystems. As the arctic climate continues to warm, altering regional as well as local hydrologic regimes, the persistence and ecological functioning of these open-water habitats may be altered dramatically. Researchers have documented the disappearance of many small, high-latitude lakes; however, our knowledge of the quantity and extent of open-water habitats remains scarce. Our objective was to collect baseline water-quality data and document the quantity and extent of these open-water islands and their association with stands of cotton wood and poplar during the winter. This dataset consists of water quality and macroinvertebrate data collected from sites in northern Alaska on May 1, 2007.

Tags: alaska, apatania-sp, arcynopteryx-sp, baetis-bicaudatus, bryophyte-cover, capnia-sp, cheatocladius-sp, chemistry, cinygmula-spp, depths-m, diamesa-sp, dicranota-sp, diplocladius-sp, do-mg-l, eukiefferiella-sp, hydrobaenus-sp, macroinvertebrate, micropsectra-sp, nemata, oligochaeta, orthocladius-cricotopus-complex, ostracoda, pagastia-sp, pericoma-sp, ph, plumiperla-sp, podmosta-sp, prostoia-sp, pseudodiamesa-sp, rheocricotopus-sp, richness, sp-cond-ms-cm, temperature-c, thienemanniella-sp, trombidiformes, turbellaria, unknown-orthocladiinae, velocity-m-s, water, water-quality, width-m, zapada-oregonensis-gr
Organization: Department of the Interior
Police Data Hub

<p><span style='font-size:16px;'><span>The Tempe Police Data Hub promotes transparency, accountability, and community trust through open access to public safety data and collaborative information sharing.&nbsp;</span></span></p><p><span style='font-size:16px;'><span>&nbsp;In this hub site, you'll find data related to:</span></span></p><ul><li><span style='font-size:16px;'><span>Calls for Service&nbsp;</span></span></li><li><span style='font-size:16px;'><span>Arrests</span></span></li><li><span style='font-size:16px;'><span>Use of Force </span><i><span>(Coming Soon)</span></i></span></li></ul><p>&nbsp;</p><div><span style='font-size:16px;'><span>Site is Google Translate enabled.</span></span></div><div>&nbsp;</div><div><span style='font-size:16px;'><span>DO NOT DELETE OR MODIFY THIS ITEM. This item is managed by the ArcGIS Hub application.</span></span></div>

Tags: arizona, arrests, calls-for-service, community-trust, data-transparency, hub, public-safety, tempe, use-of-force
Organization: City of Tempe
Hormone Data

Hormones quantified from marine mammal and sea turtle tissue provide information about the status of each animal sampled, including its sex,  reproductive status and nutritional condition.

Tags: biological data, blubber, doc/noaa/nmfs/swfsc, hormone, national marine fisheries service, noaa. u.s. department of commerce, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Reproductive data for groundfish

The ROCKFISH database houses data from rockfish species collected by the SWFSC FED along the California coast as part of a reproductive study originating in the winter of 2009 to assess spatial, environmental and maternal effects on egg production. Basic morphometric data, reproductive state, fecundity, condition, age, sampling location and dates are recorded.  In addition, historic datasets are being compiled and assimilated into the ROCKFISH database to compare current fecundity estimates to those in the 1950s, 80s, and 2000s from various published and unpublished sources.  Under construction are tables documenting an ongoing effort in production ageing of chilipepper rockfish collected by the NWFSC trawl survey to assess trends in mean size-at-age from the 1980s to current and estimate reader variability and error in age estimation.

Tags: 1950-present, california current, doc/noaa/nmfs/swfsc, early life history, fecundity, flatfish, groundfish, histology, maturity, national marine fisheries service, noaa. u.s. department of commerce, reproduction, rockfish, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Acoustic telemetry

To determine movements of green turtles in the nearshore foraging areas, we deployed acoustic tags and determined their movements through active and passive acoustic telemetry in San Diego Bay and the Long Beach area.

Tags: distribution, doc/noaa/nmfs/swfsc, national marine fisheries service, noaa. u.s. department of commerce, southwest fisheries science center, tag, turtle, turtle tagging and tracking
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Integrated Age-based Krill Model Fish Res 2015

An integrated, age-structured model was fitted to different combinations of survey data using two forms of selectivity (logistic or double-logistic) with time-constant or annually varying selectivity to investigate the population dynamics of Antarctic krill (Euphausia superba) near the Antarctic Peninsula. The
data were from surveys conducted by the U.S. Antarctic Marine Living Resources Program around the South Shetland Islands from 1992 to 2011. Two indices of krill biomass based on (1) trawl-net samples and (2) hydroacoustic sampling were combined with length-compositions from the nets. Sixteen model
configurations using different combinations of the two biomass surveys with the various options for modeling selectivities were examined.

Tags: acoustics, admb, admiralty bay, amlr, amlr krill models, antarctic, antarctica, bathymetry, benthic, bioacoustic, biomass, bransfield strait, cape shirreff, ccamlr, chile, clarence island, copacabana, deception island, doc/noaa/nmfs/swfsc, drake passage, ecosystem, elephant island, hydroacoustic, ikmt, king george island, krill, livingston island, marine, mocness, national marine fisheries service, noaa. u.s. department of commerce, peninsula, population, rmt8, san telmo islands, seal island, south shetlands, southwest fisheries science center, surveys, trawl, weather
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
VR2W raw datafiles

Cowcod are the primary species that have influenced groundfish regulations since 2001 in California waters. More progressive management approaches have been adopted during this time, and many rockfish species, including cowcod, now appear to be rebuilding. This rebuilding has recently translated into increased cowcod catches by both recreational and commercial fishers, and the use of descending devices has become a popular method for releasing these fish with as little harm as possible. However, post-release mortality of cowcod associated with the use of these descending devices is still unclear. We have tagged __ adult individuals using acoustic telemetry methods, and analyses of these movement data are currently underway. We will also tag juvenile and sub-adult cowcod in an effort to estimate size-dependent post-release mortality and movement patterns. This will give us a better understanding of the rebuilding status of the species, and how changes in fishing regulations might affect this rebuilding.

Tags: acoustic telemetry, barotrauma, doc/noaa/nmfs/swfsc, movement patterns, national marine fisheries service, noaa. u.s. department of commerce, post-release mortality, rockfish, rockfish acoustic telemetry, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Sea Lion Diet Data

California sea lions pup and breed at four of the nine Channel Islands in southern California. Since 1981, SWFSC MMTD has been conducting a diet study of sea lions at San Clemente Island (a small rookery) and San Nicolas Island (a large rookery). Information on the diet of sea lions is obtained from analyzing scats (i.e., fecal samples) and spewings (i.e., vomitus) collected at those two rookeries in January (winter), April (spring), July (summer), and October (autumn). Otoliths (a crystalline structure within the ear organ) from fish and beaks (mandibles composed of chitin) from cephalopods are recovered from the samples by washing each sample through sieves of varying mesh size. Otoliths and beaks, which are shaped and sized differently for each species of fish and cephalopod, respectively, are used to identify and enumerate fish, and cephalopods consumed by sea lions. Also, otoliths and beaks are measured for estimating size of prey being consumed by sea lions.

Tags: abundance, autumn, biological data, california, california sea lion, diet, doc/noaa/nmfs/swfsc, ecosystems, habitat, national marine fisheries service, noaa. u.s. department of commerce, pinniped, rookeries, san clemente island, san nicolas island, scats, southwest fisheries science center, spewings, spring, summer, united states, winter
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Rapid Population Collapse of a Key Marine Predator in the Northern Antarctic Peninsula - Antarctic Fur Seal Population Dynamics

Antarctic fur seals (AFS) are an ecologically important predator and a focal indicator species for ecosystem-based Antarctic fisheries management. This species suffered intensive anthropogenic exploitation until the early 1900s, but recolonized most of its former distribution, including the southern-most colony at Cape Shirreff, South Shetland Islands (SSI). The IUCN describes a single, global AFS population of least concern; however, extensive genetic analyses clearly identify four distinct breeding stocks, including one in the SSI. To update the population status of SSI AFS, we analyzed 20 years of field-based data including population counts, body size and condition, natality, recruitment, foraging behaviors, return rates, and pup mortality at the largest SSI colony. Our findings show a precipitous decline in AFS abundance (86% decrease since 2007), likely driven by leopard seal predation (increasing since 2001, p << 0.001) and potentially worsening summer foraging conditions. We estimated that leopard seals consumed an average of 69.3% (range: 50.3Ã¢ÂÂ80.9%) of all AFS pups born each year since 2010. AFS foraging-trip durations, an index of their foraging habitat quality, were consistent with decreasing krill and fish availability. Significant improvement in the age-specific over-winter body condition of AFS indicates that observed population declines are driven by processes local to the northern Antarctic Peninsula. The loss of SSI AFS would substantially reduce the genetic diversity of the species, and decrease its resilience to climate change. There is an urgent need to reevaluate the conservation status of Antarctic fur seals, particularly for the rapidly declining SSI population.

Tags: amlr predator data, antarctic fur seal, antarctic peninsula, antarctica, arctocephalus gazella, cape shirreff, conservation status, continent, doc/noaa/nmfs/swfsc, edge population, livingston island, national marine fisheries service, noaa. u.s. department of commerce, population dynamics (ecology), san telmo islets, south shetland islands, southwest fisheries science center, top-down and bottom-up control
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
California Harpoon Fishery

This data set contains vessel logbook and landings data from harpoon vessels that fish within 200 miles of the California coast, from 1974 to present. The harpoon fishery targets swordfish and occasionally sharks. The fishery is managed by California Department of Fish and Wildlife (CDFW). The data are owned by CDFW and managed jointly by CDFW and SWFSC.

Tags: california bight, california department of fish and game (cdfg), doc/noaa/nmfs/swfsc, harpoon, landings, logbook, national marine fisheries service, noaa. u.s. department of commerce, pacific highly migratory species data, southwest fisheries science center, swordfish
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Gray Whale Survey Data

Gray whale calf production is estimated from data collected during the northbound migration as whales return to their feeding grounds in the Arctic. Counts of adult female whales with calves are made by observers and used to make the estimates.

Gray whale abundance is estimated from data collected during the southbound migration from feeding grounds in the Arctic to breeding grounds in the lagoons of Mexico. Observers record counts of whales as they pass the long-term study site at Granite Canyon, California.

Gray whale abundance is estimated from data collected during the southbound migration from feeding grounds in the Arctic to breeding grounds in the lagoons of Mexico. Counts of whales made from thermal imagery recorded during the migration are used to estimate abundance.

Tags: count, doc/noaa/nmfs/swfsc, gray, national marine fisheries service, noaa. u.s. department of commerce, shore-based survey data, southwest fisheries science center, whale
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Acoustic Doppler current profile (ADCP) data from FRD cruises

This is an archive of raw data obtained from the ADCP for cruises conducted by the SWFSC Fisheries Resources Division from 1991 to present.

Tags: adcp, doc/noaa/nmfs/swfsc, doppler, frd and calcofi cruise data, national marine fisheries service, noaa. u.s. department of commerce, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
AMRMS Aerial survey database

An aerial monitoring program was conducted during the period 1962 - 2003 in cooperation with aerial spotters working for the commercial purse seine fleet. Flights were conducted throughout the year to estimate abundance of pelagic fishes off California and Baja California, Mexico. Measurements were recorded for each identifiable species in 10'-longitude by 10'-latitude blocks. Northern anchovy, (Engraulis mordax), Pacific sardine (Sardinops sagax), Pacific bonito (Sarda chiliensis), Pacific mackerel (Scomber japonicas), jack mackerel (Trachurus symmetricus) and Bluefin tuna (Thunnus thynnus orientalis) were the most commonly reported species.

Tags: aerial monitoring program - pilot survey, blocks, doc/noaa/nmfs/swfsc, flights, national marine fisheries service, noaa. u.s. department of commerce, paths, pilots, planes, sighting types, sightings, southwest fisheries science center, species
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
AMLR Acoustics Data 1996-2011 v1.1

Calibrated, integrated, and averaged acoustics data, including estimates of krill (Euphausia superba) biomass density, collected around Elephant Island, the South Shetland Islands, and the Antarctic Peninsula by the U.S. AMLR Program. Data are integrated over depths from about 10-15m down to the bottom or 250m (whichever is shallower) and averaged over 1-nmi intervals.

Tags: acoustics, admiralty bay, amlr, amlr acoustics data 1996-2011 v1.1, antarctic, antarctica, bathymetry, bioacoustic, biomass, bransfield strait, cape shirreff, ccamlr, chile, clarence island, copacabana, copepod, deception island, doc/noaa/nmfs/swfsc, drake passage, ecosystem, elephant island, environmental, invertebrate, king george island, krill, livingston island, marine, national marine fisheries service, noaa. u.s. department of commerce, peninsula, population, salps, san telmo islands, seal island, south shetlands, southwest fisheries science center, surveys, zooplankton
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
California Cooperative Oceanic Fisheries Investigations (CalCOFI)Database

This database contains ichthyoplankton data collected as part of the California Cooperative Oceanic Fisheries Investigations (CalCOFI) program and other cruises that were designed to assess the status coastal pelagic species and the California Current ecosystem from 1951 to present. The primary data are eggs and larvae captured in ring or bongo nets (oblique tows), Calvet or pairovet nets (vertical tows), and manta nets (surface tows).

Tags: anchovy, bongo net, calcofi, california cooperative ocean fisheries investigations, california current, doc/noaa/nmfs/swfsc, fishery research vessel, frd and calcofi cruise data, mackerel, manta net, national marine fisheries service, noaa. u.s. department of commerce, pairovet net, sardine, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Adelie Penguin Telemetry Data

The dataset contains geographic location estimates of Adelie penguins (Pygoscelis adeliae) tracked via Argos satellite telemetry in the Southern Ocean for the U.S. Antarctic Marine Living Resources project from 1996-10-29 to 2013-02-19. Birds were instrumented with back-mounted Argos satellite transmitters at the Copacabana Colony (62.21S, 58.42W) on King George Island during the austral summer breeding seasons (October - February) from 1996 to 2013. Typical deployments during the breeding season lasted 5 to 8 days, while some winter deployments lasted several months. The data set identifies the sex of the bird tracked (male, female, or unknown) and the age of the bird (adult). The data also identify the breeding stage of the bird during the summer tracking period (incubation, brood/guard, or creche) or is noted as 'winter' if tracked outside the summer breeding season. The data include the date (DD/MM/YYYY) and time (GMT) of the location estimate. Finally, a categorical estimate of uncertainty in the location estimate is provided by Argos quality codes (3,2,1,0,A,B).

Tags: adelie, admiralty bay, amlr, amlr predator data, antarctica, archival tag, bransfield strait, brood, copacabana, doc/noaa/nmfs/swfsc, east antarctica, ecosystem, egg-laying, environmental, fledgling, gentoo, king george island, mark-recapture, national marine fisheries service, noaa. u.s. department of commerce, penguins, pygoscelis, south orkneys, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Scientific Computer System (SCS) data from FRD cruises

This is a set of raw unprocessed data from the SCS of NOAA ships for cruises conducted by the SWFSC Fisheries Resources Division. It includes periodic data of the ships position and date/time, thermosalinograph measurements, flourometer readings, and CTD samples.

Tags: california current, ctd, doc/noaa/nmfs/swfsc, frd and calcofi cruise data, national marine fisheries service, noaa. u.s. department of commerce, scientific computer system, scs, southwest fisheries science center, thermosalinograph, tsg
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Integrated Krill Model WG-SAM-14/20

The integrated modeling framework for Antarctic krill (Euphausia superba) has been extended to include estimates of krill growth consistent with survey data and to use multi-nation survey data collected from 1981 to 2014 near the Antarctic Peninsula. Four models of the population dynamics of Antarctic krill in Subarea 48.1 based on different aggregations of the data are described to illustrate the capabilities of the framework.

Tags: acoustics, admb, admiralty bay, amlr, amlr krill models, antarctic, antarctica, bathymetry, benthic, bioacoustic, biomass, bransfield strait, cape shirreff, ccamlr, chile, clarence island, copacabana, deception island, doc/noaa/nmfs/swfsc, drake passage, ecosystem, elephant island, hydroacoustic, ikmt, king george island, krill, livingston island, marine, mocness, national marine fisheries service, noaa. u.s. department of commerce, peninsula, population, rmt8, san telmo islands, seal island, south shetlands, southwest fisheries science center, surveys, trawl, weather
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Multiple stressor effects of ocean acidification and hypoxia on behavior, physiology, and gene expression of temperate reef fishes

The Trinidad Head Line (THL) is a transect of stations extending due west from Trinidad Head (41Â° 3.5Â¿ N)  The THL was initially established in late 2006 to provide ship-based observations of hydrographic structure and the planktonic ecosystem in coastal waters off northern California.  Since 2008, sampling has been conducted approximately monthly.  Sampling is conducted at up to six stations along the transect, three of which are over the shelf and three over the upper slope.  Data collected include hydrographic casts at each station, which measure temperature, salinity, and a suite of ancillary parameters.  Physical samples collected include water samples for asssay of nutrient and chlorophyll concentrations, and net tows for zooplankton.

Tags: 2008 to current, california, california current ecosystem, doc/noaa/nmfs/swfsc, habitat ecology team, hydrography, national marine fisheries service, noaa. u.s. department of commerce, ocean observing, pacoos, southwest fisheries science center, trinidad head, zooplankton
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
OW Smith and Sandwell v8.2 - 1/30 Degree Bathymetry & Topography

Global bathymetry and topography information at 1/30 degree resolution. Data collected by means of in-situ and satellite measurements.

Tags: bathymetry, doc/noaa/nmfs/pifsc, global, national marine fisheries service, noaa, ow, pacific islands fisheries science center, pifsc, pifsc oceanwatch (ow) metadata portfolio, topography, u.s. department of commerce
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Distribution, growth, and condition of salmonids in the central California Current Ecosystem.

The Fisheries Ecology Division of NOAAâs SWFSC conducted annual surveys of salmon and their ocean habitat in the coastal waters of northern California and southern Oregon from 1998-2016. We used a surface trawl to collect juvenile and subadult salmonids, including several ESA-listed populations of Chinook and coho salmon and steelhead. We also quantified other coastal pelagic fish and invertebrates that co-occur with salmon, and we measured spatially matched biological and physical oceanographic variables.  Juvenile salmon were frozen at sea and transported back to shore for further analysis. Scales, DNA, otoliths, stomach contents, blood plasma, and implanted tags (if present) were retained. The majority of older salmon and bycatch species were released alive at sea. Additional data recorded during our survey included seabird counts, plankton samples, echosounder readings, and CTD profiles of temperature, salinity, chlorophyll, transmissivity, and PAR.

Tags: california current ecosystem, coastal oceanography, community structure, doc/noaa/nmfs/swfsc, national marine fisheries service, nekton, noaa. u.s. department of commerce, plankton, rope trawl, salmon, salmon ecology, salmon ocean ecology, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce
Carcass Specimen Data

The Marine Mammal and Turtle Division collects data about individual cetaceans and sea turtles that come ashore, strand on the beach, were incidentally killed in the yellowfin purse-seine fishery operating in the eastern tropical Pacific (ETP)  or in the California gillnet fisheries (CAGN). The data include the species, data and location, and the sex and size of each animal. Reproductive data are also collected from some animals.

Tags: biological data, cetacean, doc/noaa/nmfs/swfsc, marine mammal, national marine fisheries service, noaa. u.s. department of commerce, pinniped, sea turtle, southwest fisheries science center
Organization: National Oceanic and Atmospheric Administration, Department of Commerce