AndreaBozzo/ceres-open-data-index huggingface dataset:
Malheur NWR: Continuous Air and Stream Temperature Data at Bridge Creek (Aquatic Health and Climate Change) - Raw and Processed Data

Continuous Temperature Data. Raw Hobo data files collected at Malheur NWR (Bridge Creek) and compiled at a regular frequency into a annual (cleaned) dataset (Excel). Bridge Creek had four locations monitored during the pilot project and these data are included in this dataset. Each location could have multiple loggers deployed (planned redundancy in case of logger failure). See the CURRENT-TL-Logger Log for details at https://ecos.fws.gov/ServCat/Reference/Profile/132469.

Air temperature sites are indicated in the name with ending character A, Water temperature is W.

BRIUSK02A: 42.842556,-118.846667
BRIUSK01W: 42.842400, -118.847019
BRIDSA01W: 42.843290, -118.849223
BRIDSA02W: 42.844310, -118.851470

Tags: air-temperature, ff01rmlh00-126, general-air-and-climate-weather-and-climate-climate-change, general-management-monitoring, general-water-hydrology-surface-water, primr-survey, water-temperature
Organization: Department of the Interior
Invasive Plant Prioritization for Inventory and Early Detection at Ruby Lake National Wildlife Refuge - Data Documentation

In 2013, a workshop was held for Ruby Lake National Wildlife Refuge to 1) review the refuge conservation situation (goals, objectives, conservation priorities), 2) review invasive plant management history (target species and areas, management approaches and techniques), 3) evaluate invasive plant inventory and early detection priorities (species and areas), and 4) identify next steps to improve the efficiency and effectiveness of invasive plant management. In 2019, the refuge used the IPIEDPT a second time to inform a follow-up inventory. This record holds the data documenting this effort.

Tags: alien, early-detection, general-biology-invasive-species-invasive-exotic-plants, invasive, inventory, ipiedpt, non-native, plants, priorities, prioritization, weeds
Organization: Department of the Interior
Multi-scale species distribution model for conserving an endangered songbird: R code and source files for analysis  https://doi.org/10.7944/P9CS78W1

The attached files were used to estimate the population size of golden-cheeked warblers in 2018 and develop a habitat model for the breeding range in Texas.

Tags: dendroica-chrysoparia, golden-cheeked-warbler, golden-cheeked-wood-warbler, setophaga-chrysoparia
Organization: Department of the Interior
Management actions dataset for Site-specific Wetland Habitat Assessment Protocol at Sonny Bono Salton Sea National Wildlife Refuge

This data set describes and documents management actions implemented on refuge management units included in the Site-specific Wetland Habitat Assessment Protocol at Sonny Bono Salton Sea National Wildlife Refuge. See the cross referenced link (ServCat ID:135492) for the data dictionary and picklist, which is managed at the Protocol Framework level.

Tags: actions, assessment, bono, dataset, habitat, management, national, protocol, refuge, salton, sea, site-specific, sonny, wetland, wildlife
Organization: Department of the Interior
Forest Inventory Phase I data for the Upper Mississippi River National Wildlife and Fish Refuge-Winona District

Forest Inventory Phase I excel data for the Upper Mississippi River National Wildlife and Fish Refuge-Winona District. Data is based off U.S. Army of Corps Engineers' MVP-ES Forest Inventory Phase I Protocol. Data covers 2006 to 2017.

Tags: arcgis, army-corps-engineers, collector, forest-inventory, general-biology-communities-and-ecosystems-forest, general-biology-communities-and-ecosystems-woodland, general-biology-infestations-and-disease-insect-pests, general-biology-infestations-and-disease-plant-diseases, general-biology-species-plants, general-management-natural-resources-management-forest-management, general-management-natural-resources-management-wildlife-management, tracheophyta, tracheophytes, vascular-plants
Organization: Department of the Interior
Northern Alaska Non-native Plant Survey data

Tabular datasets relating to invasive species detections in the northern Alaskan area. Data pertain to invasive species surveys conducted on the Arctic, Tetlin, and Kanuti National Wildlife Refuges by the Alaskan Invasive Species Program teams. Data were collected using a Survey123 form. Data were subsequently downloaded from the ArcGIS feature layer and manual quality control was performed at the end of each season by the project lead. Data were then reformatted to align with the AKEPIC data submission template (https://accs.uaa.alaska.edu/invasive-species/submit-data-to-akepic/) for submitting detection of invasive species information into the Alaska Exotic Plants Information Clearinghouse (AKEPIC) designed and run by the University of Alaska Anchorage (UAA) Alaska Center for Conservation Science (ACCS).

Tags: alaska, bokhara-clover, general-biology-invasive-species-invasive-exotic-plants, honey-clover, invasive-species, melilotus-albus, white-melilot, white-sweet-clover
Organization: Department of the Interior
Invasive Plant Prioritization for Inventory and Early Detection at Farallon Island National Wildlife Refuge- Data Documentation

In 2016, a workshop was held for Farallon Island National Wildlife Refuge to 1) review the refuge conservation situation (goals, objectives, conservation priorities), 2) review invasive plant management history (target species and areas, management approaches and techniques), 3) evaluate invasive plant inventory and early detection priorities (species and areas), and 4) identify next steps to improve the efficiency and effectiveness of invasive plant management. This record holds the data documenting this effort.

Tags: alien, early-detection, farallon, general-biology-invasive-species-invasive-exotic-plants, general-management-inventory, general-management-monitoring, invasive, inventory, ipiedpt, non-native, plants, priorities, prioritization, weeds, workshop
Organization: Department of the Interior
Supplemental Data: Baseline Inventory of Orthoptera and other high quality invertebrate food sources of the endangered Mississippi Sandhill Crane.

Six files represent data  to quantified abundance of Orthoptera and other potential arthropod prey of the Mississippi Sandhill Crane and their relationship to aboveground net primary production (ANPP) at the Mississippi Sandhill Crane National Wildlife Refuge during the growing seasons of 2018 and 2019.  Samples were collected monthly from March-October on 15 management compartments during each year of the study.  Density of Orthoptera was estimated from transect counts and arthropod biomass from sweep samples, while ANPP was estimated by harvesting aboveground vegetation in sampling quadrats.  Important orthopteran species were collected by supplemental hand netting and identified to species.

Tags: biomass, bird, endangered, food-resources, general-biology-at-risk-biota-te-species, general-biology-species-birds, general-biology-species-invertebrates, general-management-monitoring, grus-canadensis-pulla, invertebrate, mississippi-sandhill-crane, prescribed-fire, threatened
Organization: Department of the Interior
Dungeness NWR: Amphibian Inventory - Tabular Data, 2012-2013

Excel workbook with several tabs containing amphibian survey data collected at Dungeness NWR ponds during 2012-2013.

Tags: baseline, ff01rdng00-021, general-biology-species-amphibians-and-reptiles, general-management-inventory, general-management-monitoring, im, primr-survey
Organization: Department of the Interior
Fish Springs National Wildlife Refuge Odonata records 2007

Records of Odonata (damselflies and dragonflies) found at Fish Springs National Wildlife Refuge in August, 2007. This dataset provides managers with an inventory of dragonflies and damselflies and their location on Fish Springs National Wildlife Refuge.  This data was used to create a temporal, locality, and overall inventory species checklist for the refuge.

Tags: aeshna-californica, aeshna-multicolor, anax-junius, anax-walsinghami, argia-alberta, black-fronted-forktail, black-saddlebags, bleached-skimmer, blue-dasher, common-green-darner, eight-spotted-skimmer, enallagma-carunculatum, enallagma-civile, erpetogomphus-compositus, erythemis-collocata, familiar-bluet, flame-skimmer, four-spotted-skimmer, general-biology-species-invertebrates, general-management-inventory, giant-darner, ischnura-denticollis, libellula-composita, libellula-forensis, libellula-pulchella, libellula-quadrimaculata, libellula-saturata, libellula-subornata, pachydiplax-longipennis, paiute-dancer, pantala-flavescens, saffron-winged-meadowhawk, sympetrum-costiferum, sympetrum-curruptum, sympetrum-occidentale, temporal-checklist, tramea-lacerata, tule-bluet, twelve-spotted-skimmer, wandering-glider, western-meadowhawk, western-pondhawk, white-belted-ringtail
Organization: Department of the Interior
Refining the use of environmental DNA (eDNA) as a method to detect presence of the endangered Topeka Shiner (Notropis topeka)

qPCR detection results for Topeka Shiner eDNA surveys in MN and IA Oxbows. This data was used to determine the optimal eDNA sampling methods for this species in oxbow habitats. The methods used to collect this data and the summary and interpretation of the results can be found in our final report entitled: Refining the use of environmental DNA (eDNA) as a method to detect presence of the endangered Topeka Shiner (Notropis topeka).

Tags: centrifugation, edna, environmental-dna, filtration, general-biology-at-risk-biota-te-species, general-biology-species-fishes, general-management-natural-resources-management-fisheries-management, general-management-research, notropis-topeka, oxbow, topeka-shiner
Organization: Department of the Interior
CSV Dataset for the “Development of Monitoring Techniques for Endangered Spring Endemic Invertebrates: an Assessment of Abundance.”  This CSV file is used in the analysis for the manuscript that  addresses density and statistical power for three Bitter Lake NWR invertebrates.  https://doi.org/10.7944/W3T66W

CSV Data set.  The Data Dictionary (Part 1) and Statistical Code (Part 2) are in ServCat Reference....

Tags: bitter-lake, bitter-lakes-amphipod, gammarus-desperatus, general-biology-at-risk-biota-te-species, general-biology-species-invertebrates, general-management-monitoring, invertebrate-density, juturnia-kosteri, kosters-springsnails, noels-amphipod, noels-amphipods, pyrgulopsis-roswellensis, roswell-springsnail, roswell-springsnails, springsnails
Organization: Department of the Interior
Deshka River Juvenile Salmonid Sampling Fish Data

Tabular datasets containing information pertaining to fish caught during trapping effort in the Deshka River between 2019 and 2024 to sample juvenile salmon. These data collected from the field are used to assess effort and were acquired using a Survey123 data acquisition application.

Tags: chinook-salmon, data-management-plan, deshka-river, general-management-natural-resources-management-fisheries-management, king-salmon, oncorhynchus-tshawytscha, water-temperature
Organization: Department of the Interior
Management actions dataset for Site-specific Wetland Habitat Assessment Protocol at Kern National Wildlife Refuge Complex

This data set describes and documents management actions implemented on refuge management units included in the Site-specific Wetland Habitat Assessment Protocol at Kern National Wildlife Refuge Complex. See the cross referenced link (ServCat ID:135492) for the data dictionary and picklist, which is managed at the Protocol Framework level.

Tags: actions, assessment, complex, dataset, habitat, kern, management, national, protocol, refuge, site-specific, wetland, wildlife
Organization: Department of the Interior
Biometric data

Tabular dataset of data collected from chinook salmon smolt trapping on the Chena River in May and June of 2017-2019. Trapping took place between the East end of the Fort Wainwright airfield (N 64.831952, W -147.571279) and adjacent to Chena Marina (N 64.81065, W -147.89908) in 2017, between Hamilton Acres (N 64.839650, W -147.681000) and Pikes Landing (N 64.830467, W –147.848750) in 2018, and between Nordale Road Bridge (N64.846536, W -147.410418) and Grahel Park (N 64.845831, W –147.706114) in 2019. This dataset contains the biometric and tagging data related to captured Chinook salmon.

Tags: chena-river, chinook-salmon, general-management-natural-resources-management-fisheries-management, juvenile, king-salmon, oncorhynchus-tshawytscha, smolt
Organization: Department of the Interior
Little Pend Oreille NWR: Invasive Plant Prioritization Workshop (IPIP) - Area Prioritization Results

This tabular dataset consists of a set of records, each of which has data on a single area on the refuge reviewed during the Little Pend Oreille NWR Invasive Plant Species Prioritization (IPPT) workshop. Data included in each record includes: scores for area description (integrity, resistance, etc.), risk (terrestrial pathways, aquatic pathways, etc.), status (inventory, infestation, etc.) as well as an overall score for the area.

Tags: biosphere, general-biology-invasive-species-invasive-exotic-plants, general-management-inventory, general-management-monitoring, habitat, inventory, ipedt, ipiedt, ipip, ippt, non-native-plants, prioritization, surface-water, targets, terrestrial-ecosystems, weeds, workshop
Organization: Department of the Interior
Little Pend Oreille NWR: Invasive Plant Prioritization Workshop (IPIP) - Species Prioritization Results

This tabular dataset consists of a set of records, each of which has data on a single species (or group of closely related species) reviewed during the Little Pend Oreille NWR Invasive Plant Species Prioritization (IPPT) workshop. Data included in each record includes: Invasiveness, Status, Ecological Impacts, and Legal (Larger Landscape Context).

Tags: biosphere, general-biology-invasive-species-invasive-exotic-plants, general-management-inventory, general-management-monitoring, habitat, ipedt, ipiedt, ipip, management, non-native-plants, prioritization, surface-water, targets, terrestrial-ecosystems, weeds, workshop
Organization: Department of the Interior
Counts of common murres at survey plots located at monitored breeding colonies within the Eastern Bering Sea and Gulf of Alaska from 1995 to 2022.

Tabular data set containing repeated counts of common murres collected at survey plots monitored by USFWS and other agencies at breeding colonies within the Eastern Bering Sea and Gulf of Alaska from 1995 to 2022.

Tags: common-murre, count-data, eastern-bering-sea, gulf-of-alaska, marine-heatwave, meta-analysis, north-pacific, population-loss, project-code-165910, uria-aalge
Organization: Department of the Interior
R1: Oregon Coast: 1994 Aerial Photography of Nesting Seabird Colony Islands for Monitoring Purposes - Stitched Image (Mosaics) Used to Manual Count Nesting Seabirds

Photography from helicopter taken for the purposes of resource monitoring, specifically seabird colony status and distribution. Oregon Coast aerial photography taken 6/08/1994 and 6/10/1994 at a scale of 1:4,800 - 1:10,000 on 35mm slide film.  Menasha Corp.  MD 500e Helicopter roughly 800-900' in altitude, Pilot - Ronald V. Patton, Right Front Photographer - Roy W. Lowe, USFWS, Right Rear Photographer - David S. Pitkin, USFWS 


These slides have been scanned at 1200 - 4000 DPI and have about 1-foot pixel resolution. Please note that these photos have not been georeferenced. The photos have not been orthorectified and therefore there will be photo anomalies and mis-matches between adjoining photos. Caution should be exercised if attempting to use this imagery to conduct measurements.

Tags: aerial-photograph, digital-scan, ff01rorg00-002, ff01rtar00-002, general-management-inventory, general-management-monitoring, primr, seabird-colony, slide-film
Organization: Department of the Interior
MCSP Monarch and Plant Monitoring - SAS Output Summarizing 2017 Monarch Butterfly Abundance from SOP 2 Data

Output from programming code written to summarize monarch butterfly abundance from monitoring data acquired using a modified Pollard walk at custom 2017 GRTS draw sites within select monitoring areas (see SOP 2 in ServCat reference 103367 for methods) of FWS Legacy Regions 2 and 3. Areas monitored included Balcones Canyonlands (TX), Hagerman (TX), Washita (OK), Neal Smith (IA), Necedah (WI) NWRs and several locations near the town of Lamoni, Iowa and private lands in northern Missouri.

Tags: count-data, danaus-plexippus, general-biology-communities-and-ecosystems-grassland-herbaceous, general-biology-species-invertebrates, general-biology-species-plants, general-biology-species-pollinators, general-management-monitoring, immp, mcsp-monitoring-trial, monarch, monarch-butterfly, monarch-butterfly-abundance, pollard-walk, sas-output, sop-2
Organization: Department of the Interior
Region 5 - Lake Champlain Saranac River Riverscape Habitat Survey

The Lake Champlain Fish and Wildlife Management Cooperative has focused on establishing a recreational fishery of landlocked Atlantic Salmon Salmo salar within the lake and its tributaries since the 1970s. Efforts have also been made to promote natural reproduction and restore river-run fish to tributaries within the basin. Landlocked Atlantic Salmon face many challenges during their stream-dwelling life stages (spawning and juvenile rearing), including a lack of access to viable habitat. If suitable habitat is not present, landlocked Atlantic Salmon will be unable to reproduce naturally, and the population will rely on federal and state agency intervention through stocking to subsidize low levels of natural recruitment. The U.S. Fish and Wildlife Service’s Lake Champlain Fish and Wildlife Conservation Office conducted a habitat assessment and fish community snorkel survey on the Saranac River in 2021.

Tags: atlantic-salmon, general-biology-communities-and-ecosystems-riverine, general-biology-species-fishes, general-geology-and-soils-geomorphology-stream-river-processes, general-management-natural-resources-management-fisheries-management, habitat, riparian, salmo-salar, saranac-river, snorkel-survey, substrate
Organization: Department of the Interior
MCSP Monarch and Plant Monitoring - SAS Output Summarizing 2017 Immature Monarch Butterfly and Plant Abundance from SOP 3 Data

Output from programming code written to summarize immature monarch butterfly, milkweed and nectar plant abundance from monitoring data acquired using a grid of 1 square-meter quadrats at custom 2017 GRTS draw sites within select monitoring areas (see SOP 3 in ServCat reference 103368 for methods) of FWS Legacy Regions 2 and 3. Areas monitored included Balcones Canyonlands (TX), Hagerman (TX), Washita (OK), Neal Smith (IA), Necedah (WI) NWRs and several locations near the town of Lamoni, Iowa and northern Missouri. Input data file is named 'FWS_2017_MonMonSOP3DS1_forSAS.csv' and is stored in ServCat reference 137700. See SM 5 (ServCat reference 103388) for dictionary of data fields in the input data file.

Tags: abundance, asclepias, count-data, danaus-plexippus, eggs, general-biology-communities-and-ecosystems-grassland-herbaceous, general-biology-species-invertebrates, general-biology-species-plants, general-biology-species-pollinators, general-management-monitoring, immature-monarch-butterfly, immp, larvae, mcsp, milkweed, milkweed-density, monarch, monarch-butterfly, nectar-plant-species, relative-occurrence, tracheophyta, tracheophytes, vascular-plants
Organization: Department of the Interior
2020 Annual Data Files: Centennial Valley Arctic Grayling Adaptive Management Project, 2011-present

2020's Annual Data files have been uploaded as several digital holdings with data used to support the creation of the Centennial Valley Arctic Grayling Adaptive Management Project Annual Report from 2020. Instructions for creating annual reports, updates, and factsheets are provided in the 'Centennial Valley Arctic Grayling Adaptive Management Plan Annual Report, Spring Update, and Factsheet Workflow Process' document (ServCat record #104853).
-Arctic Grayling models data
-Arctic Grayling N data
-Age at length key data
-BC length at age
-Beaver dam data
-Lakeview Ridge temp 1998-2014
-Lucas grayling photo
-Reach data
-RR CR discharge data 2020
-RR CR temperature data 2020
-Spawning habitat data 2020
-Study site figure
-Table 1 (demographic estimates)
-Winter habitat data 2020
-URRL vertices

Tags: adaptive-management, arctic-grayling, general-biology-at-risk-biota-te-species, general-biology-species-fishes, general-management-adaptive-management, general-management-natural-resources-management-water-management, genetic-diversity, instream-conditions, limiting-factor-hypothesis, non-native-trout, overwinter-habitat, spawning-habitat, suitable-spawning-habitat, thymallus-arcticus
Organization: Department of the Interior
Management actions dataset for Site-specific Wetland Habitat Assessment Protocol at Modoc National Wildlife Refuge

This data set describes and documents management actions implemented on refuge management units included in the Site-specific Wetland Habitat Assessment Protocol at Modoc National Wildlife Refuge. See the cross referenced link (ServCat ID:135492) for the data dictionary and picklist, which is managed at the Protocol Framework level.

Tags: actions, assessment, dataset, habitat, management, modoc, national, protocol, refuge, site-specific, wetland, wildlife
Organization: Department of the Interior
Fish Springs National Wildlife Refuge Odonata records 2015

Records of Odonata (damselflies and dragonflies) found at Fish Springs National Wildlife Refuge in August, 2015. This dataset provides managers with an inventory of dragonflies and damselflies and their location on Fish Springs National Wildlife Refuge.

Tags: aeshna-californica, aeshna-multicolor, anax-junius, anax-walsinghami, argia-alberta, black-fronted-forktail, black-saddlebags, bleached-skimmer, blue-dasher, common-green-darner, eight-spotted-skimmer, enallagma-carunculatum, enallagma-civile, erpetogomphus-compositus, erythemis-collocata, familiar-bluet, flame-skimmer, four-spotted-skimmer, general-biology-species-invertebrates, general-management-inventory, giant-darner, ischnura-denticollis, libellula-composita, libellula-forensis, libellula-pulchella, libellula-quadrimaculata, libellula-saturata, libellula-subornata, pachydiplax-longipennis, paiute-dancer, pantala-flavescens, saffron-winged-meadowhawk, sympetrum-costiferum, sympetrum-curruptum, sympetrum-occidentale, temporal-checklist, tramea-lacerata, tule-bluet, twelve-spotted-skimmer, wandering-glider, western-meadowhawk, western-pondhawk, white-belted-ringtail
Organization: Department of the Interior
Catch per trap data

Tabular dataset of data collected from chinook salmon smolt trapping on the Chena River in May and June of 2017-2019. Trapping took place between the East end of the Fort Wainwright airfield (N 64.831952, W -147.571279) and adjacent to Chena Marina (N 64.81065, W -147.89908) in 2017, between Hamilton Acres (N 64.839650, W -147.681000) and Pikes Landing (N 64.830467, W –147.848750) in 2018, and between Nordale Road Bridge (N64.846536, W -147.410418) and Grahel Park (N 64.845831, W –147.706114) in 2019. This dataset contains the total number of traps set on a given date and the total number of Chinook salmon captured on that given date.

Tags: chena-river, chinook-salmon, general-management-natural-resources-management-fisheries-management, juvenile, king-salmon, oncorhynchus-tshawytscha, smolt
Organization: Department of the Interior