AndreaBozzo/ceres-open-data-index huggingface dataset:
National Water Quality Data

Water quality data. 

This dataset is associated with the following publication:
Papenfus, M., B. Schaeffer, A. Pollard, and K. Loftin. Exploring the potential value of satellite remote sensing to monitor chorophyll-a for U.S. lakes and reservoirs..   ENVIRONMENTAL MONITORING AND ASSESSMENT. Springer, New York, NY, USA, 192: 808, (2020).

Tags: avoided-costs, chlorophyll-a, remote-sensing, water-quality
Organization: U.S. Environmental Protection Agency
Multiscale Landscape Integrity Approach to Stream Management Case Study Data Sets

An approach that relates biological condition of streams to landscape integrity data at the watershed, catchment and stream-reach scale in order to support stream management and decision-making. 

This dataset is associated with the following publication:
Riato, L., S. Leibowitz, and M. Weber. The use of multiscale stressors in biological condition assessments: a framework to advance the assessment and management of streams.   SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM,  NETHERLANDS,  139699, (2020).

Tags: aquatic-condition, bcg, biological-condition-gradient, catchment, catchments, ibi, instream, landscape-integrity, multiscale-analysis, national-aquatic-resource-surveys, national-hydrography-dataset, national-hydrography-dataset-plus-nhdplus, spatial-prediction, spatial-scale, streams, water-quality, watershed, watershed-metrics, watersheds
Organization: U.S. Environmental Protection Agency
Clouds Creek

Data contains information about bacterial concentrations in the water column in a mixed use watershed in Northeast GA. 

This dataset is associated with the following publication:
Sowah, R., K. Bradshaw, B. Snyder, D. Spidle, and M. Molina. Evaluation of the soil and water assessment tool (SWAT) for simulating E. coli concentrations at the watershed-scale.   SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM,  NETHERLANDS, 746: 140669, (2020).

Tags: allocation-of-fecal-sources, fecal-bacteria, swat, watershed-modeling
Organization: U.S. Environmental Protection Agency
Results from Non-Targeted Analysis of Aqueous Film Forming Foams

Screening library of detectable PFAS ions, results from identified PFAS from suspect screening of AFFF materials on the market. This dataset is not publicly accessible because: Data Property of Texas A&M University. It can be accessed through the following means: Contact Ivan Rusyn <irusyn@cvm.tamu.edu>. Format: Excel. 

This dataset is associated with the following publication:
Luo, Y., N.A. Aly, J. McCord, M. Strynar, W.A. Chiu, J.N. Dodds, E.S. Baker, and I. Rusyn. Rapid Characterization of Emerging Per- and Polyfluoroalkyl Substances in Aqueous Film-Forming Foams Using Ion Mobility Spectrometry–Mass Spectrometry.   ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 54(23): 15024–15034, (2020).

Tags: aff, high-resolution-mass-spectrometry, ion-mobility-mass-spectrometry, non-targeted-analysis, pfas
Organization: U.S. Environmental Protection Agency
Lost River Fault at Doublespring Pass Rd, Idaho 2015

This contribution comprises georeferenced, high-resolution topography and orthomosaics of part of the Lost River fault zone (LFRZ), Idaho, USA, which ruptured in the Mw 6.9 1983 Borah Peak Earthquake. The data set covers ~6.1 km of surface rupture on the LRFZ at and near Doublespring Pass Road. Point clouds and digital surface models (DSMs) were generated from low-altitude aerial photographs using Structure-from-Motion and multi-view stereo processing.    The Lost River fault zone (LRFZ) is a range-bounding, west-dipping normal fault in the northern Basin and Range province. The Mw 6.9 1983 Borah Peak earthquake occurred on it and created surface rupture along the southern portion of the Warm Spring section and the entire Thousand Springs section of the fault (Crone et al., 1987; DuRoss et al., 2019). Doublespring Pass Road (DSP) crosses the fault near the center of the Thousand Springs section. At DSP the surface rupture is well exposed and preserved, and it is very easily accessed. To the north of DSP, the surface rupture trends into a salient of limestone and complexly bifurcates into multiple strands (West Spring Block of Crone et al., 1987). North of the salient, at a site informally named Poison Spring (PS; West Spring in Crone et al., 1987), the surface rupture becomes localized again, with most displacement concentrated onto a single strand. Paleoseismic investigations have been conducted near both DSP (Hait and Scott, 1978; Schwartz and Crone, 1985) and PS (Vincent, 1995). The target sites of the data presented here were the surface rupture at DSP and PS.

Organization: OpenTopography
Lagoinha Landslide, São Paulo State, Brazil. TLS point cloud

Digital Surface Model (DSM) of a small hillslope with a landslide, São Paulo State, southeastern Brazil. Data were collected by Tomasini Geo-Technologies company, along with a team from University of São Paulo (USP) composed of: Grohmann, C.H., Gomes, E.B., Garcia, G.P.B., Viana, C.D., within the scope of research grant FAPESP #2016/06628-0 "Application of high-resolution digital elevation models in geology and geomorphology" (PI: Carlos H. Grohmann, IEE-USP). 

Organization: OpenTopography
Global Bathymetry and Topography at 15 Arc Sec: SRTM15+V2.0

The global bathymetry and topography grid at 15 Arc Sec is the latest iteration of the SRTM+ digital elevation model (DEM) where the "plus" indicates the addition of ocean bathymetry from shipboard soundings and satellite-derived predicted depths.  This DEM is a global elevation grid with a spatial sampling interval of 15 arc seconds (approximately 500 x 500 m pixel size at the equator).   New data consists of >33.6 million multibeam and singlebeam measurements collated by several institutions, namely, the National Geospatial-Intelligence Agency, Japan Agency for Marine-Earth Science and Technology, Geoscience Australia, Center for Coastal and Ocean Mapping, and Scripps Institution of Oceanography. New altimetry data consists of 48, 14, and 12 months of retracked range measurements from Cryosat-2, SARAL/AltiKa, and Jason-2, respectively.  Onshore, topography data are sourced from previously published digital elevation models, predominately SRTM-CGIAR V4.1 between 60N and 60S. ArcticDEM is used above 60N, while Reference Elevation Model of Antarctica is used below 62S.   For more information on this dataset, see its associated publication:   Tozer, B, Sandwell, D. T., Smith, W. H. F., Olson, C., Beale, J. R., & Wessel, P. (2019). Global bathymetry and topography at 15 arc sec: SRTM15+. Earth and Space Science, 6, 1847. https://doi.org/10.1029/2019EA000658  or visit the project website here for more details.

Organization: OpenTopography
Lagoinha Landslide, São Paulo State, Brazil. SfM-MVS point cloud

Digital Surface Model (DSM) of a small hillslope with a landslide, São Paulo State, southeastern Brazil. Data were collected by a team from University of São Paulo (USP) composed of: Grohmann, C.H., Gomes, E.B., Garcia, G.P.B., Viana, C.D., within the scope of research grant FAPESP #2016/06628-0 "Application of high-resolution digital elevation models in geology and geomorphology" (PI: Carlos H. Grohmann, IEE-USP). 

Organization: OpenTopography
Sierra Negra Volcano (TIR Flight 3): Galápagos, Ecuador, October 22 2018

Point cloud and temperature map of Sierra Negra Volcano (Isla Isabela, Galápagos Archipelago, Ecuador). Coverage includes two vents from Fissure 1 of the June 26, 2018 eruption of Sierra Negra and lava flows sourced from these vents. Point cloud created using Agisoft Metashape (v.1.6.1), temperature map created with additional processing in Matlab and ArcGIS. This data is used in the manuscript Mapping and classification of volcanic deposits using multi-sensor Unoccupied Aerial Systems, currently under review at Remote Sensing of Environment. Images taken on October 22, 2018 using a DJI Zenmuse XT thermal camera on a DJI Matrice 210 UAS. 443 total images (available upon request)

Organization: OpenTopography
Sierra Negra Volcano (TIR Flight 1): Galápagos, Ecuador, October 22 2018

Point cloud and temperature map of Sierra Negra Volcano (Isla Isabela, Galápagos Archipelago, Ecuador). Coverage includes two vents from Fissure 1 of the June 26, 2018 eruption of Sierra Negra and lava flows sourced from these vents. Point cloud created using Agisoft Metashape (v.1.6.1), temperature map created with additional processing in Matlab and ArcGIS. This data is used in the manuscript Mapping and classification of volcanic deposits using multi-sensor Unoccupied Aerial Systems, currently under review at Remote Sensing of Environment. Images taken on October 22, 2018 using a DJI Zenmuse XT thermal camera on a DJI Matrice 210 UAS. 474 total images (available upon request)

Organization: OpenTopography
Sierra Negra Volcano (TIR Flight 2): Galápagos, Ecuador, October 22 2018

Point cloud and temperature map of Sierra Negra Volcano (Isla Isabela, Galápagos Archipelago, Ecuador). Coverage includes two vents from Fissure 1 of the June 26, 2018 eruption of Sierra Negra and lava flows sourced from these vents. Point cloud created using Agisoft Metashape (v.1.6.1), temperature map created with additional processing in Matlab and ArcGIS. This data is used in the manuscript Mapping and classification of volcanic deposits using multi-sensor Unoccupied Aerial Systems, currently under review at Remote Sensing of Environment. Images taken on October 22, 2018 using a DJI Zenmuse XT thermal camera on a DJI Matrice 210 UAS. 490 total images (available upon request)

Organization: OpenTopography
Sierra Negra Volcano (Visual): Galápagos, Ecuador, October 22 2018

Point cloud, DEM, and visual images of Sierra Negra Volcano (Isla Isabela, Galápagos Archipelago, Ecuador). Images taken on October 22, 2018. Coverage includes two vents from Fissure 1 of the June 26, 2018 eruption of Sierra Negra and lava flows sourced from these vents. Created using Agisoft Metashape (v.1.6.1). Images from DJI Zenmuse X4S camera on a DJI Matrice 210 UAS. This data is used in the manuscript Mapping and classification of volcanic deposits using multi-sensor Unoccupied Aerial Systems, currently under review at Remote Sensing of Environment.

Organization: OpenTopography
PFAS Online SPE Supporting Information

Supporting information for manuscript, including chromatograms, peak areas, and standard recovery data to support PFAS manuscript. 

This dataset is associated with the following publication:
Sanan, T., and M. Magnuson. Analysis of per- and polyfluorinated alkyl substances (PFAS) of sub-sampled water matrices with online solid phase extraction/isotope dilution tandem mass spectrometry.   JOURNAL OF CHROMATOGRAPHY A. Elsevier Science Ltd, New York, NY, USA, 1626: 461324, (2020).

Tags: analytical-method, isotopic-dilution, lc-ms-ms, polyfluorinated-alkyl-substances-pfas, solid-phase-extraction
Organization: U.S. Environmental Protection Agency
Determining the utility of regression-based CO:NOx ratios for emissions validation in a near-road environment

Datasets used in the analysis presented in the manuscript “Determining the utility of regression-based CO:NOx ratios for emissions validation in a near-road environment”.  The datasets include hourly CO and NOx emissions estimated by the MOVES model (CONOx_MOVES.xlsx) and 5 minute NO, NO2, NOx and CO observations from the Las Vegas near-road field study described in the paper (LV_5min_S1S2S3S4.xlsx). Each file is an excel spread sheet (.xlsx) and metadata on the variables within the files is provided under the Readme tab of each spreadsheet. 

This dataset is associated with the following publication:
Simon, H., B. Henderson, R. Owen, K. Foley, M. Snyder, and E. Kimbrough. Variability in observation-based onroad emission constraints from a near-road environment.   ATMOSPHERE. MDPI AG, Basel,  SWITZERLAND, 11(11): 1243, (2020).

Tags: air-quality-modeling, biomass-burning, cmaq, emissions, wildland-fire
Organization: U.S. Environmental Protection Agency
Cross Basin Isoscapes

Water stable isotope data (hydrogen and oxygen isotopes of H2O) for 5 river basins in Washington state and Alaska.  The samples were collected in 2017 during summer baseflow season.  Collection sites were distributed across each basin to represent the range of possible isotope values within the basin, but sample sites were easily accessible. 

This dataset is associated with the following publication:
McGill, L., E.A. Steel, J.R. Brooks, R.T. Edwards, and A. Fullerton. Elevation and spatial structure explain most surface-water isotopic variation across five Pacific Coast basins.   JOURNAL OF HYDROLOGY. Elsevier Science Ltd, New York, NY, USA, 583: 124610, (2020).

Tags: climate-change, geology, river-flow, stable-isotopes, water-resources, water-supply
Organization: U.S. Environmental Protection Agency
Microbial Source Tracking Marker Concentrations in the Chattahoochee River National Recreation Area Watershed in 2015-2017, Georgia, USA

The dataset contains Esherichia coli and quantitative polymerase chain reaction data for microbial source tracking markers in the Chattahoochee River and streams within the Chattahoochee River National Recreation area from samples collected in the winter and summer of the federal fiscal years 2016 and 2017. Six water samples were collected from three sites on the Chattahoochee River each season. Eleven stream sites and one additional site on the Chattahoochee River were sampled once each season, with the exception of two sites, which were not sampled in winter FY16. This dataset is not publicly accessible because: Data is the property of USGS. It can be accessed through the following means: Contact Anna McKee, corresponding author, at USGS. Format: The dataset contains Esherichia coli and quantitative polymerase chain reaction data for microbial source tracking markers in the Chattahoochee River and streams within the Chattahoochee River National Recreation area from samples collected in the winter and summer of the federal fiscal years 2016 and 2017. Six water samples were collected from three sites on the Chattahoochee River each season. Eleven stream sites and one additional site on the Chattahoochee River were sampled once each season, with the exception of two sites, which were not sampled in winter FY16. 

This dataset is associated with the following publication:
McKee, A., M. Molina, M. Cyterski, and A. Couch. Microbial source tracking (MST) in Chattahoochee River National Recreation Area: Seasonal and precipitation trends in MST marker concentrations, and associations with E. coli levels, pathogenic marker presence, and land use.   WATER RESEARCH. Elsevier Science Ltd, New York, NY, USA, 171: 115435, (2020).

Tags: e-coli, fecal-indicator-bacteria, hydrogen-peroxide, microbial-metabolism
Organization: U.S. Environmental Protection Agency
Grab vs Composite metadata

Data described concentrations of human adenovirus, crAssphage and Pepper Mild Mottle virus in 1 hour composite wastewater samples and 24 h composite wastewater samples. This dataset is not publicly accessible because: Data is the property of CSIRO. It can be accessed through the following means: Contact Warish Ahmed, Warish.Ahmed@csiro.au. Format: Data is in excel format. 

This dataset is associated with the following publication:
Ahmed, W., A. Bivins, P.M. Bertsch, K. Bibby, P. Gyawali, S.P. Sherchan, S.L. Simpson, K.V. Thomas, R. Verhagen, M. Kitajima, J.F. Mueller, and A. Korajkic. Intraday variability of indicator and pathogenic viruses in 1-h and 24-h composite wastewater samples: Implications for wastewater-based epidemiology.   ENVIRONMENTAL RESEARCH. Elsevier B.V., Amsterdam,  NETHERLANDS, 193: 110531, (2021).

Tags: adenovirus, crassphage, pepper-mild-mottle-virus, sars-cov-2
Organization: U.S. Environmental Protection Agency
Mass Spectrometry Abundances and Estimated Concentrations for Emerging Chlorinated Polyfluorinated Polyether Compounds Impacting the Waters of Southwestern New Jersey

All detected feature abundances from NTA pre-screen on TOF and merged in-depth Orbitrap data collection from 2017 water set, as well as Orbitrap raw abundances and estimated concentrations from ClPFPECA compounds from 2019 POET samples. 

This dataset is associated with the following publication:
McCord, J., M. Strynar, J. Washington, E.L. Bergman, and S.M. Goodrow. Emerging Chlorinated Polyfluorinated Polyether Compounds Impacting the Waters of Southwestern New Jersey Identified by Use of Nontargeted Analysis.   Environmental Science & Technology Letters. American Chemical Society, Washington, DC, USA, 7(12): 903-908, (2020).

Tags: cipfpeca, mass-spectrometry, new-jersey, non-targeted-analysis, pfas, surface-water
Organization: U.S. Environmental Protection Agency
Methane and carbon dioxide emission rates from reservoirs in Ohio, Kentucky, and Indiana

This dataset contains methane and carbon dioxide emission rates measured in 32 reservoirs distributed across Ohio, Kentucky, and Indiana.  Ancillary environmental data including reservoir morphology, watershed characteristics, and water chemistry are also included. 

This dataset is associated with the following publication:
Beaulieu, J., S. Waldo, D. Balz, W. Barnett, A. Hall, M. Platz, and K. White. Methane and carbon dioxide emissions from reservoirs: Controls and Upscaling.   Journal of Geophysical Research - Biogeosciences. American Geophysical Union, Washington, DC, USA, 125(12): e2019JG005474, (2020).

Tags: carbon-dioxide, chlorophyll-a, dissolved-gas, machine-learning, methane, reservoir
Organization: U.S. Environmental Protection Agency
Data for manuscript "Incorporating upstream emissions into electric sector nitrogen oxide reduction targets"

This dataset provides the values used to develop the figures within the manuscript "Incorporating upstream emissions into electric sector nitrogen oxide reduction targets". 

Here is the abstract from that manuscript: Electricity production is a major source of air pollutants in the U.S. Policies to reduce these emissions can result in the power industry choosing to apply controls or switch to fuels with lower combustion emissions. However, the life cycle emissions associated with various fuels can differ considerably, potentially impacting the effectiveness of fuel switching. Life cycle emissions, which include emissions from extracting, processing, transporting, and distributing fuels, as well as manufacturing and constructing new generating capacity, have received less consideration in policy-making. Life cycle analysis allows quantification of these emissions such that they can be considered in decision-making. We examine a hypothetical electric sector emission reduction target for nitrogen oxides using the Global Change Assessment Model with U.S. state-level resolution. When only power plant emissions are considered in setting an emission reduction target, fuel switching leads to an increase in upstream emissions that offsets a portion of the targeted reductions. When fuel extraction, processing, and transport emissions are included under the reduction target, the resulting control strategy meets the required reductions and does so at lower cost. However, manufacturing and construction emissions increase, indicating that it may be beneficial to consider these sources as well. In the real world, life cycle-based approaches could be implemented by allowing industry to earn reduction credits by reducing upstream emissions. We discuss some of the limitations of such an approach, including the difficulty in identifying the location of upstream emissions, which may occur across regulatory authorities or even outside of the U.S. 

This dataset is associated with the following publication:
Babaee, S., D. Loughlin, and O. Kaplan. Incorporating upstream emissions into electric sector nitrogen oxide reduction targets.   Cleaner Engineering and Technology. Elsevier B.V., Amsterdam,  NETHERLANDS, 1: 100017, (2020).

Tags: air-quality, emissions, gcam-usa, integrated-assessment-modeling
Organization: U.S. Environmental Protection Agency
Data for LMDI Analysis

this data file presents the underlying raw data to generate figures in the manuscript. 

This dataset is associated with the following publication:
Isik, M., and O. Kaplan. Understanding Technology, Fuel, Market and Policy Drivers for New York State's Power Sector Transformation.   Sustainability. MDPI AG, Basel,  SWITZERLAND, 13(1): 265, (2020).

Tags: air-pollution, community-decision-making, energy-modeling, energy-systems-modeling, energy-water-nexus, greenhouse-gas-emissions, lmdi, markal, power-sector, state-level-emissions
Organization: U.S. Environmental Protection Agency
TOC data_all samples_v1.0_2018_04_21

Detailed water quality data through a treatment train before, during and after a storm perturbation in source water. 

This dataset is associated with the following publication:
Neil, C., Y. Zhao, A. Zhao, J. Neal, M. Meyer, and J. Yang. Trihalomethane precursor reactivity changes in drinking water treatment unit processes during a storm event.   Water Science and Technology:  Water Supply. IWA Publishing, London,  UK, 19(7): 2098–2106, (2019).

Tags: chlorination, climate-variability, disinfection-byproducts, trihalomethanes, turbidity, water-treatment
Organization: U.S. Environmental Protection Agency
Temperature, ozone, and PM2.5 data for "Associations Between Simulated Future Changes in Climate, Air Quality, and Human Health" by Fann et al., 2021.

This dataset contains modeled temperature, ozone, and PM2.5 data for the United States over the 21st century, using two global climate model scenarios and two emissions datasets. 

This dataset is associated with the following publication:
Fann, N., C. Nolte, M. Sarofim, J. Martinich, and N. Nassikas. Associations Between Simulated Future Changes in Climate, Air Quality, and Human Health.   JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION. JAMA, Meudon,  FRANCE, 4(1): e2032064, (2021).

Tags: air-quality, climate-change, cmaq, dynamical-downscaling, regional-climate-modeling
Organization: U.S. Environmental Protection Agency
A Framework for Modeling Lead in Premise Plumbing Systems using EPANET

This dataset contains information related to sampling efforts from which model parameters were developed. 

This dataset is associated with the following publication:
Burkhardt, J., H. Woo, J. Mason, F. Shang, S. Triantafyllidou, M. Schock, D. Lytle, and R. Murray. Framework for Modeling Lead in Premise Plumbing Systems Using EPANET.   JOURNAL OF WATER RESOURCES PLANNING AND MANAGEMENT. American Society of Civil Engineers  (ASCE), Reston, VA, USA, 146(12): 04020094, (2020).

Tags: advection-dispersion, copper-and-lead-ions, epanet, lead, modeling, premise-plumbing
Organization: U.S. Environmental Protection Agency
nano Cu microRNA DEG list

data sets included in this study:

Differential Expressed gene lists for nano Cu CuCl2 treated HepG2 cells through RNA sequencing.
Differential Expressed microRNA lists for nano Cu and CuCl2 treated HepG2 cells through small RNA sequencing.
Sequencing data was quantified using Partek annotation and the STAR-2.5.3a aligner, aligned to human genome hg19.  Normalization and contrast were performed using DESeq2.  MicroRNA expression was quantified with mirDeep2.  Benjamini-Hochberg method for multi-testing correcton was included in DESeq2. 

Tags: hepg2-cells, microrna-expression, microrna-target-filter-analysis, nano-cu, signaling-pathways, transcriptomics
Organization: U.S. Environmental Protection Agency