Seq-TransfoRNA / environment.yml
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name: transforna
channels:
- pytorch
- bioconda
- conda-forge
dependencies:
- anndata==0.8.0
- dill==0.3.6
- hydra-core==1.3.0
- imbalanced-learn==0.9.1
- matplotlib==3.5.3
- numpy==1.22.3
- omegaconf==2.2.2
- pandas==1.5.2
- plotly==5.10.0
- PyYAML==6.0
- rich==12.6.0
- viennarna=2.5.0=py39h98c8e45_0
- scanpy==1.9.1
- scikit-learn==1.2.0
- skorch==0.12.1
- pytorch=1.10.1=py3.9_cuda11.3_cudnn8.2.0_0
- tensorboard==2.11.2
- Levenshtein==0.21.0